ggKbase home page

scnpilot_solids1_trim150_scaffold_574_curated_24

Organism: solids_Actinobacteria_1

near complete RP 50 / 55 MC: 2 BSCG 50 / 51 ASCG 13 / 38
Location: comp(19782..20171)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Salinispora pacifica RepID=UPI00036F9F5B similarity UNIREF
DB: UNIREF100
  • Identity: 53.9
  • Coverage: 102.0
  • Bit_score: 112
  • Evalue 3.90e-22
Transcriptional regulator, PadR family {ECO:0000313|EMBL:CCH20391.1}; TaxID=1150864 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora lupini str. Lupac 08.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 54.5
  • Coverage: 99.0
  • Bit_score: 110
  • Evalue 2.10e-21
PadR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 53.0
  • Coverage: 100.0
  • Bit_score: 105
  • Evalue 1.50e-20

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Micromonospora lupini → Micromonospora → Micromonosporales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 390
ATGTCGGCGCTCGCGGCCGGGCCGCTGCACGGCTACGCGCTGCTATCGGAGGTGGCCGACTTGTCCGGCGGGCGGATCCGGCTGCGTGTCGGCACCCTGTACGGCATCGTCGACCGGCTGGCCGAGGACGAGGTCATCGAGGTCGACCACGAAGAGATCATCGACTCGCGACTGCGCCGCTACTACCGGCTGTCGACCAACGGCCGCCGGGTACTCGCCGACGAGGCCGCACGCCAGGCGGCCAACGCCCAGATCGCCGTCGGTCGCCTGGCCGCCGCGAAAAGGTCGACGCGACCGGCGCGAAACGAGTCGGGGCTGCGCAGCACACTCGTCCGCAACGACCCCCGGGCCGGTGAAGCGCCGGTGCTCGCATGGTCACCGACGATCTAG
PROTEIN sequence
Length: 130
MSALAAGPLHGYALLSEVADLSGGRIRLRVGTLYGIVDRLAEDEVIEVDHEEIIDSRLRRYYRLSTNGRRVLADEAARQAANAQIAVGRLAAAKRSTRPARNESGLRSTLVRNDPRAGEAPVLAWSPTI*