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scnpilot_solids1_trim150_scaffold_678_curated_16

Organism: solids_Actinobacteria_1

near complete RP 50 / 55 MC: 2 BSCG 50 / 51 ASCG 13 / 38
Location: 18755..19156

Top 3 Functional Annotations

Value Algorithm Source
Ribonuclease VapC {ECO:0000256|HAMAP-Rule:MF_00265}; Short=RNase VapC {ECO:0000256|HAMAP-Rule:MF_00265};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00265};; Toxin VapC {ECO:0000256|HAMAP-Rule:MF_00265}; TaxID=298653 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. (strain EAN1pec).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 69.5
  • Coverage: 131.0
  • Bit_score: 187
  • Evalue 1.10e-44
Ribonuclease VapC n=1 Tax=Frankia sp. (strain EAN1pec) RepID=A8LGG9_FRASN similarity UNIREF
DB: UNIREF100
  • Identity: 69.5
  • Coverage: 131.0
  • Bit_score: 187
  • Evalue 7.50e-45
PilT domain-containing protein; K07062 similarity KEGG
DB: KEGG
  • Identity: 69.5
  • Coverage: 131.0
  • Bit_score: 187
  • Evalue 2.40e-45

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Taxonomy

Frankia sp. EAN1pec → Frankia → Frankiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 402
ATGGCGCGATCGCTGATCGTTGACACCACTGTTCTCATCGCGTACGAGCGTGGCGACTTCGATCGGGCGTCCGTTGACGACGACGATCTTGCGATCGCCGCCGTCACGGTCGCGGAGTATCGGGTCGGCATCGAACTTGCGGACTCCGTAGAACGTGCCGCGGAACGGCGCCGGGCGCTCGAGGCCATCCGGCACGCGATCCCGGCACTGGTGTACACGGAGTCGACGGCACTCCATCACGCACGGCTGCTCGCGCATGTCCGCAGAACGGGACGGAGGCGCGGGGCGCACGACCTCATCATTGCCGCGCACGCCGCGGAGACTGGCCGTACGGTGCTCAGTCACGACGCCGCCGCCCGGTTCGGCGATCTGCCAGGGGTGGTCGCCGCCGACCCGTCGTAG
PROTEIN sequence
Length: 134
MARSLIVDTTVLIAYERGDFDRASVDDDDLAIAAVTVAEYRVGIELADSVERAAERRRALEAIRHAIPALVYTESTALHHARLLAHVRRTGRRRGAHDLIIAAHAAETGRTVLSHDAAARFGDLPGVVAADPS*