ggKbase home page

scnpilot_solids1_trim150_scaffold_378_curated_57

Organism: solids_Actinobacteria_1

near complete RP 50 / 55 MC: 2 BSCG 50 / 51 ASCG 13 / 38
Location: comp(58903..59277)

Top 3 Functional Annotations

Value Algorithm Source
30S ribosomal protein S12 n=1 Tax=Streptomyces scabrisporus RepID=UPI0003674E8C similarity UNIREF
DB: UNIREF100
  • Identity: 95.2
  • Coverage: 124.0
  • Bit_score: 237
  • Evalue 5.90e-60
rpsL; 30S ribosomal protein S12; K02950 small subunit ribosomal protein S12 similarity KEGG
DB: KEGG
  • Identity: 95.9
  • Coverage: 123.0
  • Bit_score: 237
  • Evalue 2.40e-60
30S ribosomal protein S12 {ECO:0000256|HAMAP-Rule:MF_00403, ECO:0000256|RuleBase:RU003623}; TaxID=2064 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Kitasatospora.;" source="Kitasatospora griseola (Streptomyces griseolosporeus).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 95.9
  • Coverage: 123.0
  • Bit_score: 237
  • Evalue 1.10e-59

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Kitasatospora griseola → Kitasatospora → Streptomycetales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 375
ATGCCCACCATCCAGCAGCTCGTCCGAAAGGGCCGCCAGAGCAAGTCGAGCAAGTCGAAGACTCCGGCGCTCAAGGGCAGCCCACAGCGCCGCGGCGTCTGCACGCGCGTGTACACGACCACCCCGAAGAAGCCGAACTCGGCACTGCGCAAGGTGGCGCGCGTCAAGCTCACCAGCGGCATCGAGGTCACGGCGTACATCCCGGGCGAGGGCCACAACCTGCAGGAGCACTCCATCGTGCTCGTGCGCGGCGGCCGTGTGAAGGATCTCCCCGGCGTGCGGTACAAGATCATCCGCGGCTCGCTGGACACCCAGGGCGTCAAGAACCGCAAGCAGGCGCGCAGCCGCTACGGCGCGAAGAAGGAGAAGGCCTAA
PROTEIN sequence
Length: 125
MPTIQQLVRKGRQSKSSKSKTPALKGSPQRRGVCTRVYTTTPKKPNSALRKVARVKLTSGIEVTAYIPGEGHNLQEHSIVLVRGGRVKDLPGVRYKIIRGSLDTQGVKNRKQARSRYGAKKEKA*