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scnpilot_solids1_trim150_scaffold_378_curated_68

Organism: solids_Actinobacteria_1

near complete RP 50 / 55 MC: 2 BSCG 50 / 51 ASCG 13 / 38
Location: comp(73077..73241)

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L33 n=3 Tax=Frankia RepID=RL33_FRAAA similarity UNIREF
DB: UNIREF100
  • Identity: 87.0
  • Coverage: 54.0
  • Bit_score: 109
  • Evalue 1.40e-21
rpmG; 50S ribosomal protein L33; K02913 large subunit ribosomal protein L33 similarity KEGG
DB: KEGG
  • Identity: 87.0
  • Coverage: 54.0
  • Bit_score: 109
  • Evalue 4.40e-22
50S ribosomal protein L33 {ECO:0000255|HAMAP-Rule:MF_00294}; TaxID=106370 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. (strain CcI3).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 87.0
  • Coverage: 54.0
  • Bit_score: 109
  • Evalue 2.00e-21

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Taxonomy

Frankia sp. CcI3 → Frankia → Frankiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 165
GTGGCTGCCACCGATGTCCGCCCGAAGATCACGCTCGCGTGCGAGACCTGCAAGAACCGCAACTACATCACGCGGAAGAACCGTCGCAACGACCCGGATCGGCTGGAGCTCAAGAAGTTCTGCCCGACCTGCGGCAAGCACACGGGGCACAAAGAGACCCGCTAG
PROTEIN sequence
Length: 55
VAATDVRPKITLACETCKNRNYITRKNRRNDPDRLELKKFCPTCGKHTGHKETR*