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scnpilot_solids1_trim150_scaffold_1425_curated_19

Organism: solids_Actinobacteria_1

near complete RP 50 / 55 MC: 2 BSCG 50 / 51 ASCG 13 / 38
Location: comp(16635..17360)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, IclR family n=1 Tax=Thermobispora bispora (strain ATCC 19993 / DSM 43833 / CBS 139.67 / JCM 10125 / NBRC 14880 / R51) RepID=D6YBA1_THEBD similarity UNIREF
DB: UNIREF100
  • Identity: 53.7
  • Coverage: 244.0
  • Bit_score: 237
  • Evalue 1.50e-59
IclR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 53.7
  • Coverage: 244.0
  • Bit_score: 237
  • Evalue 4.70e-60
Transcriptional regulator, IclR family {ECO:0000313|EMBL:ADG88461.1}; TaxID=469371 species="Bacteria; Actinobacteria; Actinobacteria incertae sedis; Thermobispora.;" source="Thermobispora bispora (strain ATCC 19993 / DSM 43833 / CBS 139.67 /; JCM 10125 / NBRC 14880 / R51).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 53.7
  • Coverage: 244.0
  • Bit_score: 237
  • Evalue 2.10e-59

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Taxonomy

Thermobispora bispora → Thermobispora → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 726
GTGGCGAGCCAGCCCACTCTGATCAGGTCGGTGCAACGCGCACTGAACCTGCTGGAGTTTGTCGGGGACCAGGACCGACCGATCAGCGCGAAGGCGCTCGCGCGGGCGGCCGGGTTGCCGCTGCCTACCGCTTACCATCTGCTGCGCACCCTCGTGTACGAGGGCTATCTGGACAAGCTCGATGACGGTTATATCCTCGGCATCCAGGCCGTCACCCTCAGCGGTGGTCTGGGCGTCGAACGCTTCCGGCCGATACTCGCGGCGTTGCGCGACGATCTCGGAGCCGCCTGCTATCTGGCGGTGTTCCGTGACGGCGAGATCGATCTCATCGACGTGGTGGACAGCTCCCGCTATCCGCGCACCGATCTTTGGGTGGGCCTGCATGACGCCGCCCACGCAACTGCGTTCGGAAAGGCGATCCTGGCACAGCTCAAGGCGGACGTGCGCAACGACTACTTCTCCCGGCATCCGCTGGTCGATCTGACGCCGCGGACCGTCACCAGTCGCTCCCGGCTCATCCACGACCTCGACCATCAGGCCGGACTCGCCGTGGACGCCGGCGAGTACCACCTCGACGTGGCCTGCGTTGCCGTCCCCATCGAAGCGACCGGTCTGCCCGCTGCCGTGGCAGTGTCGGTGCCGTCGAGCCGCCGCCGCCAGCTGCGGGATTGCCGGCCCGTACTGCAGCGAGGGGCGGACGCACTGGGCCTGGCGCTGTCGCGGTAG
PROTEIN sequence
Length: 242
VASQPTLIRSVQRALNLLEFVGDQDRPISAKALARAAGLPLPTAYHLLRTLVYEGYLDKLDDGYILGIQAVTLSGGLGVERFRPILAALRDDLGAACYLAVFRDGEIDLIDVVDSSRYPRTDLWVGLHDAAHATAFGKAILAQLKADVRNDYFSRHPLVDLTPRTVTSRSRLIHDLDHQAGLAVDAGEYHLDVACVAVPIEATGLPAAVAVSVPSSRRRQLRDCRPVLQRGADALGLALSR*