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scnpilot_solids1_trim150_scaffold_230_curated_24

Organism: solids_Actinobacteria_1

near complete RP 50 / 55 MC: 2 BSCG 50 / 51 ASCG 13 / 38
Location: comp(28602..29612)

Top 3 Functional Annotations

Value Algorithm Source
LacI family transcriptional regulator n=3 Tax=Amycolatopsis mediterranei RepID=D8HTY4_AMYMU similarity UNIREF
DB: UNIREF100
  • Identity: 71.4
  • Coverage: 329.0
  • Bit_score: 460
  • Evalue 2.00e-126
lacI; LacI family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 71.4
  • Coverage: 329.0
  • Bit_score: 460
  • Evalue 6.20e-127
Transcriptional regulator, LacI family {ECO:0000313|EMBL:AEK43071.1}; TaxID=713604 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis mediterranei (strain S699) (Nocardia mediterranei).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 71.4
  • Coverage: 329.0
  • Bit_score: 460
  • Evalue 2.80e-126

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Taxonomy

Amycolatopsis mediterranei → Amycolatopsis → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1011
GTGCAATTCAGCCCTCGAGTCACGATCCGCGACGTCGCCGCCCAGGCCGGCGTGTCGGTGGCGACCGTCTCGAAGGTGATCAATGCGCGATACGGCGTCGCCGCCGAGACCACGCAGCGGGTGCGCGCCGTCATCGACGAGTTGGGCTACGAGGCGAGCCTAGTCGCGCAGAGCCTGCGCAACCAGCGCACCAACGTCATCGGCGTCCTGGTCGCGGACATCGAGCCGTTCAGCGCCGAACTGCTCAAGGGCGCCGCTGACGCCATCCGGGGCTCCGGCTTCGAACTGGTCGTCTACTCTGCCGGCGGGCGCGCCAGCGAACAGGTCGGCTGGGAGCGCCGTTACCTCTCCCGGCTGTCGGGCACGCTGCTGGACGGGGCCGTTCTGGTGACCCCCACCATCACCGAGGCGGACATGCGCCGGGGCACGCCGATCGTCGCGGTGGACCCGCACACCGGCCCGGCGGACCTGCCCACCGTGGCCGCGGACAGCCTGGCCGGCGCCCGGTCGGCCGTCGAGTACCTGTTACAGCTCGGCCATCAACGCATCGGCCTGATCACCGGCCGGCCCGATCTGCAGTCCGCCCAGCTCCGCGAGGCAGGCTACCGCCAGGCGCTCACCGATGCCGGGCAAGCCGTCGATCCCGCATTGATCGTCCCCGGCGGGTACGACCCGGACGTGGCGCGGGAGTCGGCCCGGGCGCTACTGTCGTCGCCGTCCCGCCCCACCGCCATCCTGGGCGCCAACGACATCTCCGCCATCGCCGTCATCGACGCCGCCCGGTCGCTTGGTCTGTCCGTGCCGGAGGACCTCTCCGTGGCCGGATTCGACAACATCCCGGAGTCGGCGCTGTGCGACCCGCCGCTGACCACCGTGGAGCAGCCGATCCGTGCGATGGGCCGCCGCGCCGTCGAAATGCTGATCGCGCTGATCCGCGGCGAGGACGTCGCGGAGCGCCACCTCACCCTGGCGACCAGGATCGTGGTGCGAGCCAGCACCGCGGCGCGATAG
PROTEIN sequence
Length: 337
VQFSPRVTIRDVAAQAGVSVATVSKVINARYGVAAETTQRVRAVIDELGYEASLVAQSLRNQRTNVIGVLVADIEPFSAELLKGAADAIRGSGFELVVYSAGGRASEQVGWERRYLSRLSGTLLDGAVLVTPTITEADMRRGTPIVAVDPHTGPADLPTVAADSLAGARSAVEYLLQLGHQRIGLITGRPDLQSAQLREAGYRQALTDAGQAVDPALIVPGGYDPDVARESARALLSSPSRPTAILGANDISAIAVIDAARSLGLSVPEDLSVAGFDNIPESALCDPPLTTVEQPIRAMGRRAVEMLIALIRGEDVAERHLTLATRIVVRASTAAR*