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scnpilot_solids1_trim150_scaffold_230_curated_28

Organism: solids_Actinobacteria_1

near complete RP 50 / 55 MC: 2 BSCG 50 / 51 ASCG 13 / 38
Location: 32510..33727

Top 3 Functional Annotations

Value Algorithm Source
isocitrate dehydrogenase (EC:1.1.1.42); K00031 isocitrate dehydrogenase [EC:1.1.1.42] similarity KEGG
DB: KEGG
  • Identity: 84.9
  • Coverage: 405.0
  • Bit_score: 715
  • Evalue 1.30e-203
Isocitrate dehydrogenase [NADP] {ECO:0000256|PIRNR:PIRNR000108}; EC=1.1.1.42 {ECO:0000256|PIRNR:PIRNR000108};; TaxID=446462 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Actinosynnema.;" source="Actinosynnema mirum (strain ATCC 29888 / DSM 43827 / NBRC 14064 / IMRU; 3971).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 84.9
  • Coverage: 405.0
  • Bit_score: 715
  • Evalue 5.70e-203
isocitrate dehydrogenase n=1 Tax=Dehalobacter sp. FTH1 RepID=UPI000382B2B4 similarity UNIREF
DB: UNIREF100
  • Identity: 86.6
  • Coverage: 404.0
  • Bit_score: 725
  • Evalue 4.00e-206

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Taxonomy

Actinosynnema mirum → Actinosynnema → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1218
ATGGCGAAGATCAAGGTGACGGGCACCGTAGCCGAGCTCGACGGCGACGAGATGACCAGGATCATCTGGCAGTTCATCAAGGACCGGCTGATCCTGCCCTACCTGGACCTCAACCTCGATTACTACGACCTGGGCATCGAGCATCGGGACGCCACGGACGACCAGGTCACCATCGACGCCGCGAACGCCATCAAGAAGCACGGCGTGGGCGTCAAGTGCGCCACCATCACACCGGACGAGGCGCGGGTCGAGGAGTTCGGCCTGAAGAAGATGTGGAAGTCGCCGAACGGCACCATCCGCAACATCCTGGGCGGCGTCATCTTCCGCGAGCCGATCGTCATCTCCAACATCCCGCGGCTCGTGCCCGGCTGGACCAAGCCCATCGTCATCGGCCGCCACGCCTTCGGCGACCAGTACAAGGCCACCGATGCGAAGATCCCGTCGGGTGGCACCGTGACGCTCACCTGGACCCCGGACGACGGTTCGGCCCCGATGGAGCTCGAGGTCGTGACGATGCCCGAGGACGGCGGCGTCGTCATGGGCATGTACAACTTCAACAAGTCCATCGCGGACTTCGCGCGAGCCAGCTTCGAATACGGACTGCAGCGCAACTATCCCGTGTACCTGTCCACCAAGAACACGATCCTGAAGGCCTACGACGGGCAGTTCAAGGACATCTTCGCCGAGGTGTTCGAAAACGAGTACGCCGGGCGTTTCCAGGCCGCCGGGATCACCTACGAGCACCGGCTGATCGACGACATGGTGGCCTCCGCGCTCAAGTGGGAGGGCGGCTACGTCTGGGCCTGCAAGAACTACGACGGCGATGTCCAGTCGGACACGGTGGCCCAGGGCTATGGCTCACTGGGGCTGATGACGTCGGTGCTGATGACGCCGGACGGGAAGACCGTGGAGGCGGAGGCCGCGCACGGCACGGTGACCCGGCACTACCGGCAGCACCAGGCCGGCAAGCCCACGTCCACCAACCCGATCGCCTCCATCTACGCGTGGACCGGCGGTCTCAAGCATCGCGGCAAGCTGGACGGGACACCGGAGGTGACTCACTTCGCGGAGACGCTGGAGCGCGTCATCATCGAGACCGTGGAATCCGGCAAGATGACGAAGGACCTGGCGCTGCTGGTCGGCCCGGACCAGGGCTGGCTGACCACTGAGGAGTTCCTGGCGGCGCTGGACGAGAATCTGCAGGCCAAGCTCGCCTGA
PROTEIN sequence
Length: 406
MAKIKVTGTVAELDGDEMTRIIWQFIKDRLILPYLDLNLDYYDLGIEHRDATDDQVTIDAANAIKKHGVGVKCATITPDEARVEEFGLKKMWKSPNGTIRNILGGVIFREPIVISNIPRLVPGWTKPIVIGRHAFGDQYKATDAKIPSGGTVTLTWTPDDGSAPMELEVVTMPEDGGVVMGMYNFNKSIADFARASFEYGLQRNYPVYLSTKNTILKAYDGQFKDIFAEVFENEYAGRFQAAGITYEHRLIDDMVASALKWEGGYVWACKNYDGDVQSDTVAQGYGSLGLMTSVLMTPDGKTVEAEAAHGTVTRHYRQHQAGKPTSTNPIASIYAWTGGLKHRGKLDGTPEVTHFAETLERVIIETVESGKMTKDLALLVGPDQGWLTTEEFLAALDENLQAKLA*