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scnpilot_solids1_trim150_scaffold_2442_curated_21

Organism: solids_Actinobacteria_1

near complete RP 50 / 55 MC: 2 BSCG 50 / 51 ASCG 13 / 38
Location: comp(21138..21572)

Top 3 Functional Annotations

Value Algorithm Source
Ribonuclease VapC {ECO:0000256|HAMAP-Rule:MF_00265}; Short=RNase VapC {ECO:0000256|HAMAP-Rule:MF_00265};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00265};; Toxin VapC {ECO:0000256|HAMAP-Rule:MF_00265}; TaxID=1068978 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis methanolica 239.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 53.1
  • Coverage: 143.0
  • Bit_score: 152
  • Evalue 5.30e-34
hypothetical protein n=1 Tax=Amycolatopsis sp. ATCC 39116 RepID=UPI0002626221 similarity UNIREF
DB: UNIREF100
  • Identity: 55.3
  • Coverage: 141.0
  • Bit_score: 157
  • Evalue 1.20e-35

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Taxonomy

Amycolatopsis methanolica → Amycolatopsis → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 435
GTGACCGTTTTCGCCGATTCGTCCGCCCTCGTCAAGCTCTATGCCGACGAACCGAACGCGGAGCACATACGCGCCATCGAGACGTTCGTAGCGAGCGCGCTCATCCGCGTCGAGGTTCCCTCGGCACTGTGGCGCAAGTGCCGTATGGGAGAGTTCACCACGGCCGATGCGCGGAGGCTCATCGATGAGTTCGAGGTCGATTTCTTCGGCTCCGTCGACACCGCCCCGCGATTCGTCTCGATCGCGCCAACCCCGCCCATCCTCGACTCCGCAGCCCACCTCTGCGCCGTCCACGGGCTGCGCGCTTACGACTCCGTACAGCTTTCCAGTGCATTGGCAGTCCGCGATGCCGACGCCGGCTGCCACGAATTCGCCGCCTTCGACACGCAGTTGCGCGATGCCGCCGCCGCGGAAGGTTTCCAACTGGTGCCCTGA
PROTEIN sequence
Length: 145
VTVFADSSALVKLYADEPNAEHIRAIETFVASALIRVEVPSALWRKCRMGEFTTADARRLIDEFEVDFFGSVDTAPRFVSIAPTPPILDSAAHLCAVHGLRAYDSVQLSSALAVRDADAGCHEFAAFDTQLRDAAAAEGFQLVP*