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This organism can only be binned in the context of its binning project PLM2_30cm_b1_sep2016. Please contact the project owner (lavik17@gmail.com) to become a member and gain access.

scnpilot_solids1_trim150_scaffold_330_curated_15

Organism: solids_Actinobacteria_1

near complete RP 50 / 55 MC: 2 BSCG 50 / 51 ASCG 13 / 38
Location: 16163..16459

Top 3 Functional Annotations

Value Algorithm Source
Uncharacterized protein n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8XIC7_NAKMY similarity UNIREF
DB: UNIREF100
  • Identity: 50.0
  • Coverage: 48.0
  • Bit_score: 62
  • Evalue 2.70e-07
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 50.0
  • Coverage: 48.0
  • Bit_score: 62
  • Evalue 8.50e-08
Uncharacterized protein {ECO:0000313|EMBL:ACV78496.1}; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 50.0
  • Coverage: 48.0
  • Bit_score: 62
  • Evalue 3.80e-07

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Taxonomy

Nakamurella multipartita → Nakamurella → Nakamurellales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 297
ATGTCCAAGCGGTCCACCCCGAGCCCCGCGTCCCGCGGGAGCGCTTTGGGCTGGGGCGCTACTTCGACCATGTTCGGCGGAATCGCCGTATGGGGCGGAGGAGCTTGGCTGCTCGATCATTGGTGGGGGACGCACTTCGCCACACCGATCGGGGCGGTCCTGGGCGCGGCTCTCGGGGTATATGCGGTCGTGATGCGTTACGGTCGCGACCCCGAGGGGCAACAGACGCAGCAACAGGTGACGGAAAGACCGGTCGATCCTTCCCGAGGATCGCAACCGGCCAGTCTCGAGAGGTAA
PROTEIN sequence
Length: 99
MSKRSTPSPASRGSALGWGATSTMFGGIAVWGGGAWLLDHWWGTHFATPIGAVLGAALGVYAVVMRYGRDPEGQQTQQQVTERPVDPSRGSQPASLER*