ggKbase home page

scnpilot_solids1_trim150_scaffold_1081_curated_4

Organism: solids_Actinobacteria_1

near complete RP 50 / 55 MC: 2 BSCG 50 / 51 ASCG 13 / 38
Location: comp(2438..3550)

Top 3 Functional Annotations

Value Algorithm Source
LysR family transcriptional regulator n=1 Tax=Streptomyces scabrisporus RepID=UPI000371FDAF similarity UNIREF
DB: UNIREF100
  • Identity: 46.4
  • Coverage: 302.0
  • Bit_score: 250
  • Evalue 2.00e-63
LysR family transcriptional regulator {ECO:0000313|EMBL:EDY54583.2}; TaxID=463191 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sviceus ATCC 29083.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 44.3
  • Coverage: 307.0
  • Bit_score: 237
  • Evalue 3.20e-59
LysR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 43.3
  • Coverage: 307.0
  • Bit_score: 224
  • Evalue 4.80e-56

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Streptomyces sviceus → Streptomyces → Streptomycetales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1113
ATGAAGCGTTCGGACCAGCGCAAACGCCTGAGCAGCACGAATGACGGTGTGGCGGCTCTCACGCCGGCAGTGCCGGATGCGCCGGTCAGCCCGGCTGCGGCCGGCCCGAGGGCAGCGTCATCCGCCGCCTCGCAGCCGCACCGGGGCATCCAGACGGCGGCGCGCGGACCGGCGCTCGAGCCGATCCGGGTGCGCGACCTGGACACGCGCCTGCTGCTCGCGTTCCGGGCCGTCGCCGTGGAGGGCACGTTCGGGCGGGCCGCCGCCCGGCTCGGCTACACCCAGTCCGCCGTCAGCCAGCAGATCGCCTCGTTGGAAGCAGTGATCGGCGAGCCGCTGTTCGAACGGCACGGCGGCCCGAAGCCGGTCACACTCACACCGCTGGGCGGAGTGCTGCTGGAGCGGGTACGCGAACTGCTGGGCGTCCTGGAGTCGATCACGACGGATGTCGCGAACTACCGCTCCGGGGACCTGGGCCGCATCGACGTCGGCACCATCCAGTCGATCTCGACGGCGCTGCTGCCCACCATCCTGCGGCGGCTGAAGGCGGAGCGGCCGGGCCTCGATATGCGCCTGCAGGAGCATTACGAGGAGACGGAGCTGGTGGAGGGCGTGGCCGGCGGCGATCTCGACGTCACGTTCCTGGTGAACGGCAACGCACCGACCATCAAGCGGGTCGACATCCTGACCGACCCGTTCGTCGTGGTCGCACGCGCCGAGGATGTCGGCCCCGGCCCTGTGACGATCGAGCGGCTTGCGACCGGCCCGCTCATCGGGCAGATCGCCAGCACGTTCCAGGACGAGCTGGATGCCATGCTGCAGACGGCCGGGTGCGAGACCGACTACGTCTTCCGCAGCGCGGACAACGGTGTCGTGGTCTCGATGGTGCGAGCCGGGCTCGGATTGGCGATCCTGCCGCGGTTGGCGCTGCAGGGGGAGCTCGCGGATCCCCGGCTGGCGATCCGCACCCTCGACCCGCCGATCCCGGCCAGGGTGATCCGGCTGGCGTGGCGACGTGATCGCCCGCTGTCGCCGGCCGCGACACGGTTCCGCGATCTGGCCATCGAGGTGGCCGCCGAACTCGGCCACCGCCACCCGGTTCTCGCGCCGTGA
PROTEIN sequence
Length: 371
MKRSDQRKRLSSTNDGVAALTPAVPDAPVSPAAAGPRAASSAASQPHRGIQTAARGPALEPIRVRDLDTRLLLAFRAVAVEGTFGRAAARLGYTQSAVSQQIASLEAVIGEPLFERHGGPKPVTLTPLGGVLLERVRELLGVLESITTDVANYRSGDLGRIDVGTIQSISTALLPTILRRLKAERPGLDMRLQEHYEETELVEGVAGGDLDVTFLVNGNAPTIKRVDILTDPFVVVARAEDVGPGPVTIERLATGPLIGQIASTFQDELDAMLQTAGCETDYVFRSADNGVVVSMVRAGLGLAILPRLALQGELADPRLAIRTLDPPIPARVIRLAWRRDRPLSPAATRFRDLAIEVAAELGHRHPVLAP*