ggKbase home page

scnpilot_solids1_trim150_scaffold_1029_curated_47

Organism: solids_Actinobacteria_1

near complete RP 50 / 55 MC: 2 BSCG 50 / 51 ASCG 13 / 38
Location: comp(44426..44764)

Top 3 Functional Annotations

Value Algorithm Source
PemK family protein; K07171 mRNA interferase [EC:3.1.-.-] similarity KEGG
DB: KEGG
  • Identity: 58.9
  • Coverage: 112.0
  • Bit_score: 126
  • Evalue 5.40e-27
PemK family protein n=1 Tax=Frankia symbiont subsp. Datisca glomerata RepID=F8AXN3_FRADG similarity UNIREF
DB: UNIREF100
  • Identity: 58.9
  • Coverage: 112.0
  • Bit_score: 126
  • Evalue 1.70e-26
PemK family protein {ECO:0000313|EMBL:AEH10389.1}; TaxID=656024 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia symbiont subsp. Datisca glomerata.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 58.9
  • Coverage: 112.0
  • Bit_score: 126
  • Evalue 2.40e-26

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Frankia symbiont of Datisca glomerata → Frankia → Frankiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 339
GTGACGCAACCGGCGCTCGCGCCCGGCCAGGTCTGGTTCACCGACTTCGAGCCGGTGCGCGGACGCGAGCAGGGCAAAGACCGGCCGGCACTCATCGTGTCCTCGGAGTTCCACCTCGCGCTGACCGCCGGCCAGCTCGTGATCGTGCTGCCGCTGACCACCGTAGAGAGACCCGGCTGGCTTCACCGCGTCGCCACCGGCAGCGGCGGCTGGGTGATCACAGAACAGGTCCGCACCGTCTCAGCCACGCGCTTGCGGTGCTTCGCCCCGGAGATCGCGCTCACCGCAGACGAACTCGCCGACGTGCGCCGCGTCCTGGCCCACATGCTCACCGTGTGA
PROTEIN sequence
Length: 113
VTQPALAPGQVWFTDFEPVRGREQGKDRPALIVSSEFHLALTAGQLVIVLPLTTVERPGWLHRVATGSGGWVITEQVRTVSATRLRCFAPEIALTADELADVRRVLAHMLTV*