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scnpilot_solids1_trim150_scaffold_3816_curated_1

Organism: solids_Actinobacteria_1

near complete RP 50 / 55 MC: 2 BSCG 50 / 51 ASCG 13 / 38
Location: comp(150..491)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase-binding protein RbpA n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8XAL6_NAKMY similarity UNIREF
DB: UNIREF100
  • Identity: 89.3
  • Coverage: 112.0
  • Bit_score: 212
  • Evalue 1.90e-52
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 89.3
  • Coverage: 112.0
  • Bit_score: 212
  • Evalue 5.80e-53
RNA polymerase-binding protein RbpA {ECO:0000256|HAMAP-Rule:MF_01483}; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 89.3
  • Coverage: 112.0
  • Bit_score: 212
  • Evalue 2.60e-52

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Taxonomy

Nakamurella multipartita → Nakamurella → Nakamurellales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 342
ATGGCCGACCGTGTCCTGAGGGGCAGCCGTCTCGGGTCGACAAGCTACGAGGCCGATCGCAACCACGACCTCGCACCTCGCCGCACCGCGACCTACCACTGCCCGCGCGACCACGACTTCACTGTTCCGTTGGCCGACGATGCGGACGTGCCCGCGGTGTGGGATTGCCGCATGCATGGCCTCGAATCCACACTCGTGGACGGCTCCGTGCCGGACACCAAGGCCGCTAAGCCGCCGCGCACCCACTGGGACATGCTGCTGGAGCGGCGTTCCATCGACGAACTCGAGGAGATCCTGAAGGAGCGGCTCGACGAGTTGAAGGCCAAGCGCACGGCGCTCTAG
PROTEIN sequence
Length: 114
MADRVLRGSRLGSTSYEADRNHDLAPRRTATYHCPRDHDFTVPLADDADVPAVWDCRMHGLESTLVDGSVPDTKAAKPPRTHWDMLLERRSIDELEEILKERLDELKAKRTAL*