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scnpilot_solids1_trim150_scaffold_2122_curated_15

Organism: solids_Actinobacteria_1

near complete RP 50 / 55 MC: 2 BSCG 50 / 51 ASCG 13 / 38
Location: 20007..20852

Top 3 Functional Annotations

Value Algorithm Source
Succinate dehydrogenase membrane subunit sdhd1 n=1 Tax=Rhodococcus triatomae BKS 15-14 RepID=M2WVX3_9NOCA similarity UNIREF
DB: UNIREF100
  • Identity: 53.8
  • Coverage: 279.0
  • Bit_score: 321
  • Evalue 1.20e-84
Succinate dehydrogenase membrane subunit sdhd1 {ECO:0000313|EMBL:EME21767.1}; TaxID=1278078 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus triatomae BKS 15-14.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 53.8
  • Coverage: 279.0
  • Bit_score: 321
  • Evalue 1.70e-84
integral membrane protein similarity KEGG
DB: KEGG
  • Identity: 53.6
  • Coverage: 280.0
  • Bit_score: 313
  • Evalue 6.00e-83

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Taxonomy

Rhodococcus triatomae → Rhodococcus → Corynebacteriales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 846
ATGGTCCAATTACGACCCAACGGAGTGGACGCGCCCGGTCGGGCGTCCGTCGGCAAGCGCACACTCCGCACCGACAAGTGGTGGGCGAACCCGCTGATCACCTGGATCCTGCTGACGGTCTGGGTCGTGTATGCGACTGTTCGCGCATTCATGAACAAGTACTTCTTCACCGCGCAGGTCGCCGATGGCAGCGTCGACCCGACGCTGCCGCACTACCTGACCCCGTTCGCGTCGCCGTGTGTCACGGCGACCTGCCCTCCGGAGGCCCAGGAGTTCGGGCAGTGGTTCGGTTCCTGGTACCCGACGTTCTTACCGGCGGCTCTTATCGCGCTGATCTTCGTGCTCGGCTTCCGTACCACCTGCTACTACTACCGCAAGGCCTACTACCGCTCCTTCGCGCGCACGCCCAGCGCGTGCGCGGTGCCGGAGCCGCACAAGAGGTACAACGGCGAGACCAGGTTCCCGCTGATCTTCCAGAACGCGCACCGCTACTTCTTCTACGCGGCGGTCGTCGTCGGCTGCTTCCTCACCTGGGACGTGATCGCATCCCTGCGATACGGCTTCGGTTTCGGCACGCTCATCATGGCCGCGAACGCGATCCTGCTGTGGTGCTACACGCTCGGCTGCCACGCGTGCCGGCACGCCATCGGCGGCCAGCTCAGGCACTTCTCCAAGCATCCGGTGCGCTACCGCATGTGGAAGTGGGTGAGCACGCTGACCAACCGTCACATGCAGTTTGCCTGGACCACCCTCGGCACGCTCATGATCACTGATGCCTACGTTCTGCTGCTCTCGTGGGGTGCCGCACGCGGCTACTCGCTCGACCTGTTCTACATCTCGTTCTAA
PROTEIN sequence
Length: 282
MVQLRPNGVDAPGRASVGKRTLRTDKWWANPLITWILLTVWVVYATVRAFMNKYFFTAQVADGSVDPTLPHYLTPFASPCVTATCPPEAQEFGQWFGSWYPTFLPAALIALIFVLGFRTTCYYYRKAYYRSFARTPSACAVPEPHKRYNGETRFPLIFQNAHRYFFYAAVVVGCFLTWDVIASLRYGFGFGTLIMAANAILLWCYTLGCHACRHAIGGQLRHFSKHPVRYRMWKWVSTLTNRHMQFAWTTLGTLMITDAYVLLLSWGAARGYSLDLFYISF*