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scnpilot_solids1_trim150_scaffold_1001_curated_32

Organism: solids_Actinobacteria_1

near complete RP 50 / 55 MC: 2 BSCG 50 / 51 ASCG 13 / 38
Location: comp(34734..36101)

Top 3 Functional Annotations

Value Algorithm Source
Carbohydrate ABC transporter substrate-binding protein, CUT1 family n=1 Tax=Intrasporangium calvum (strain ATCC 23552 / DSM 43043 / JCM 3097 / NBRC 12989 / 7 KIP) RepID=E6SEN5_INTC7 similarity UNIREF
DB: UNIREF100
  • Identity: 66.7
  • Coverage: 451.0
  • Bit_score: 584
  • Evalue 7.20e-164
carbohydrate ABC transporter substrate-binding protein; K02027 multiple sugar transport system substrate-binding protein similarity KEGG
DB: KEGG
  • Identity: 66.7
  • Coverage: 451.0
  • Bit_score: 584
  • Evalue 2.30e-164
Carbohydrate ABC transporter substrate-binding protein, CUT1 family {ECO:0000313|EMBL:ADU46636.1}; Flags: Precursor;; TaxID=710696 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Intrasporangium.;" source="Intrasporangium calvum (strain ATCC 23552 / DSM 43043 / JCM 3097 /; NBRC 12989 / 7 KIP).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 66.7
  • Coverage: 451.0
  • Bit_score: 584
  • Evalue 1.00e-163

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Taxonomy

Intrasporangium calvum → Intrasporangium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1368
ATGCGCCGATCAATCATCATTGCCGCGCTTGCGGTGGTCGGTATGGTGGCCGCCGCGTGCGGCTCGTCGACCGGCGATGGTGCCGGCAGCACGGACTCGAGCGCCGGCAACCAGAGCTCGTCGAGCTCGGAGTCTGCCTCTCAGTCCGCCGACGCCGGATCCGGCGACGCAGCGACCGACGGTGGCGCGGGCGGCGACGTCGGCGTGTTCACCTGGTGGGCCGACGGTTCCGAGAAGAAGGGCCTCGACGCTCTGGAGGGCCTGTTCAAGGAGAAGTTCCCGAAGGACAACTTCGTCAACCTGGCCGTGGCCGGTGGCGCCGGCTCCAACGCCAAGGCGAAGCTGGCGGCTGACCTGCAGGCCGGCAACCCGCCGGACTCCTTCCAGGGCCACGCGGGTGCCGAGCTGACCGACTACATCAACAACGGGCAGATCGAGCCGGTTGACGATCTGTACAAGGCCGAGGGCTGGAACGACGTGTTCCCGGCCGACCTGCTCGCGCGCCTGACGGTCGACGGTCACATCTACTCGGTGCCGTCGAACATCCACCGTGCCAACGTGGTGTGGGTCAACACCAAGGTCCTCACCGATGCAGGCATCGATCCGAAGACCGCCCCGAAGGACATCGCCGCCTGGATCGCCGACATGGACAAGCTGAAGGCCGCCGGCGTGGCGACCCCGCTGTCGATCGCCGGCACCTGGACCCAGGTCGAGCTGCTGGAGACCGTGCTGATCTCGGATCTCGGCGCCGACGGCTACAACGGCCTGTTCACCGGTTCCACCGACTGGGCCAGCGACGGCGTCACCAAGGCCCTCAACGACTACAAGACGCTGCTGACCTACGCCAACACCGCCGCCGACGGCGACGACTGGCCGAGTGCCACCGACATGGTCATCGACGGCACCGCCGCGTACAACGTGATGGGCGACTGGGCCGTGGCCGAGTTCGCCGACAAGGGCAAGGTCGACGGCACCGACTACAGCTACTGGGCGGTTCCCGGCCAGGAGGGCGTCTACGACTTCCTCGCCGACTCGTTCACGCTGCCCAAGGGCGCCCCGAAACCCGAAGGTGCCAAGGACTGGCTGCGACTGATCGGCTCCGCCGACGGACAGAAGGCCTTCAACCTGGCCAAGGGCTCCATCCCGGCCCGCACCGACATCGCTCCGGACGATTTCCCGCCGTACCAGCAGTGGGCGATGGGTGAGTTCCAGAAGGACACGATCGTCTCCTCGATCGCGCACGGCGCTGCCGTGAATCTGAGCTGGGGCACCGACATCTCCAACGCCGTGTCGCAGTTCTACGGCAGCCAGGATGTCGCAGCGCTGCAGGCGGCTCTGGTCACCGCGGCGCAGAGCAACATCAAGTAA
PROTEIN sequence
Length: 456
MRRSIIIAALAVVGMVAAACGSSTGDGAGSTDSSAGNQSSSSSESASQSADAGSGDAATDGGAGGDVGVFTWWADGSEKKGLDALEGLFKEKFPKDNFVNLAVAGGAGSNAKAKLAADLQAGNPPDSFQGHAGAELTDYINNGQIEPVDDLYKAEGWNDVFPADLLARLTVDGHIYSVPSNIHRANVVWVNTKVLTDAGIDPKTAPKDIAAWIADMDKLKAAGVATPLSIAGTWTQVELLETVLISDLGADGYNGLFTGSTDWASDGVTKALNDYKTLLTYANTAADGDDWPSATDMVIDGTAAYNVMGDWAVAEFADKGKVDGTDYSYWAVPGQEGVYDFLADSFTLPKGAPKPEGAKDWLRLIGSADGQKAFNLAKGSIPARTDIAPDDFPPYQQWAMGEFQKDTIVSSIAHGAAVNLSWGTDISNAVSQFYGSQDVAALQAALVTAAQSNIK*