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scnpilot_solids1_trim150_scaffold_27501_curated_1

Organism: solids_Brevundimonas_1

near complete RP 43 / 55 MC: 1 BSCG 45 / 51 MC: 1 ASCG 7 / 38 MC: 2
Location: comp(2..304)

Top 3 Functional Annotations

Value Algorithm Source
Type III secretion apparatus protein SpaR/YscT/HrcT n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4R0N0_BREDI similarity UNIREF
DB: UNIREF100
  • Identity: 98.0
  • Coverage: 101.0
  • Bit_score: 194
  • Evalue 6.00e-47
Type III secretion apparatus protein SpaR/YscT/HrcT {ECO:0000313|EMBL:EGF94159.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 98.0
  • Coverage: 101.0
  • Bit_score: 194
  • Evalue 8.50e-47
translocation protein; K03228 type III secretion protein SctT similarity KEGG
DB: KEGG
  • Identity: 32.2
  • Coverage: 87.0
  • Bit_score: 59
  • Evalue 5.60e-07

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Taxonomy

Brevundimonas diminuta → Brevundimonas → Caulobacterales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 303
GTGTTCGAGGGCCTGGACAGTCTGTTCGACAACGCCATCCTCGTGGCGGTGTCGACCACGCGGGTGGCGACGACCTTCCTGCTGATGCCGCTGCTGTCGCCGCAGACGGTTCCGGCGATGGTTCGCAACTCCATCTTCCTGGTGTTCGGCCTGGCGGTGCTGACCATGCAGCCGCAGGTGGCCCAGATGACCCTGCCGACGGTCCAGTGGATCCTGCTGTTCGGCAAGGAGGCCCTGGTCGGAGTGGTCATCGGCTTCTTCTTCGCCACCATGCTGTGGGCGTTCGAGGCCGCCGGCCAGATC
PROTEIN sequence
Length: 101
VFEGLDSLFDNAILVAVSTTRVATTFLLMPLLSPQTVPAMVRNSIFLVFGLAVLTMQPQVAQMTLPTVQWILLFGKEALVGVVIGFFFATMLWAFEAAGQI