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scnpilot_solids1_trim150_scaffold_18853_curated_2

Organism: solids_Brevundimonas_1

near complete RP 43 / 55 MC: 1 BSCG 45 / 51 MC: 1 ASCG 7 / 38 MC: 2
Location: 1287..1760

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor, sigma-70 family protein n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4R240_BREDI similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 157.0
  • Bit_score: 302
  • Evalue 2.50e-79
RNA polymerase sigma factor, sigma-70 family protein {ECO:0000313|EMBL:EGF94360.1}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 157.0
  • Bit_score: 302
  • Evalue 3.50e-79
RNA polymerase, sigma-24 subunit, ecf subfamily; K03088 RNA polymerase sigma-70 factor, ECF subfamily similarity KEGG
DB: KEGG
  • Identity: 56.6
  • Coverage: 145.0
  • Bit_score: 166
  • Evalue 6.60e-39

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Taxonomy

Brevundimonas diminuta → Brevundimonas → Caulobacterales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 474
ATGGACGACGCGACGTCCGCCCTGACGCGCGACGAGGGATTCGCGGCGTTGACGCGGCGGTTGCGGGCGCCGTTGACGCATTTCTTCCTGCGGCGGTCGAAATCGTCGGCGGATGCGGAGGAGATGGTTCAGGATCTGTTCCTGCGCCTGATGCGCCGCGCGGACCTGATGAGCCTGCAGAACATCGACGGCTATGTCTTCGAGGCGGCGGCCAACATTGCGCGGGATCGGGGGCGCTATGAGCAGGCGCGGGGTCGAGGCCTGCATGTCGAGATCAACGACGCCGTGGCCGAGTATGACGCGCCTGACGCCGAACAGATCATCGCGGGGAGGCAGCGTTTGAAACGGATGCTGGCGGCGCTGGACGCCCTGCCGCCGCGTGCGCGGGCCGTGGTGATCCTGCGTCGGTTCGAGAACCTGACCTATCCGCAGATCGCCCAGCGTCTGGGCATTTCGGTCAGCGCGGTCGAGAAG
PROTEIN sequence
Length: 158
MDDATSALTRDEGFAALTRRLRAPLTHFFLRRSKSSADAEEMVQDLFLRLMRRADLMSLQNIDGYVFEAAANIARDRGRYEQARGRGLHVEINDAVAEYDAPDAEQIIAGRQRLKRMLAALDALPPRARAVVILRRFENLTYPQIAQRLGISVSAVEK