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scnpilot_solids1_trim150_scaffold_10927_curated_4

Organism: solids_Brevundimonas_1

near complete RP 43 / 55 MC: 1 BSCG 45 / 51 MC: 1 ASCG 7 / 38 MC: 2
Location: 1482..1841

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit omega {ECO:0000256|HAMAP-Rule:MF_00366, ECO:0000256|SAAS:SAAS00054253}; Short=RNAP omega subunit {ECO:0000256|HAMAP-Rule:MF_00366};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00366, ECO:0000256|SAAS:SAAS00094401};; RNA polymerase omega subunit {ECO:0000256|HAMAP-Rule:MF_00366}; Transcriptase subunit omega {ECO:0000256|HAMAP-Rule:MF_00366}; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundim similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 119.0
  • Bit_score: 235
  • Evalue 5.20e-59
DNA-directed RNA polymerase subunit omega; K03060 DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] similarity KEGG
DB: KEGG
  • Identity: 85.7
  • Coverage: 119.0
  • Bit_score: 207
  • Evalue 3.40e-51
DNA-directed RNA polymerase subunit omega n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4R0S8_BREDI similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 119.0
  • Bit_score: 235
  • Evalue 3.70e-59

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Taxonomy

Brevundimonas diminuta → Brevundimonas → Caulobacterales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 360
ATGGCCCGCGTCACTGTCGAAGACTGCATCGAAAAGGTGCCGAACCGCTTTGGTCTGGTTCTGCTGGCCGGTCACCGCGCCCGCAACATCGCCAATGGCGCGCCGCTGACGCTGGACCGCGACAACGACAAGAACCCGGTCGTCGCCCTGCGCGAACTGGCCGAGGACACCGTCACCCCGGACGAACTGCGCGAGAACATCATCACCACCCTGCAACGGGTCGATGAGCGGACCGAGGCCGAGGATGAAGCCGAAGTCGTGGCCCTGCTGGCCGAGCCGCAGCACATGAACATGGCCGAAGCCGAACTGATCCGCGCGCTGCAGAGCGACCGCGACGGGGGCCAGGAGGAACGCTACTGA
PROTEIN sequence
Length: 120
MARVTVEDCIEKVPNRFGLVLLAGHRARNIANGAPLTLDRDNDKNPVVALRELAEDTVTPDELRENIITTLQRVDERTEAEDEAEVVALLAEPQHMNMAEAELIRALQSDRDGGQEERY*