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scnpilot_solids1_trim150_scaffold_38317_curated_3

Organism: solids_Brevundimonas_1

near complete RP 43 / 55 MC: 1 BSCG 45 / 51 MC: 1 ASCG 7 / 38 MC: 2
Location: 1361..1483

Top 3 Functional Annotations

Value Algorithm Source
RNA 2',3'-cyclic phosphodiesterase {ECO:0000256|HAMAP-Rule:MF_01940}; Short=RNA 2',3'-CPDase {ECO:0000256|HAMAP-Rule:MF_01940};; EC=3.1.4.- {ECO:0000256|HAMAP-Rule:MF_01940};; TaxID=751586 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta ATCC 11568.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 41.0
  • Bit_score: 85
  • Evalue 1.70e-14
2'-5' RNA ligase; K01975 2'-5' RNA ligase [EC:6.5.1.-] similarity KEGG
DB: KEGG
  • Identity: 78.0
  • Coverage: 41.0
  • Bit_score: 69
  • Evalue 2.20e-10
2'-5' RNA ligase n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4R117_BREDI similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 41.0
  • Bit_score: 85
  • Evalue 1.20e-14

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Taxonomy

Brevundimonas diminuta → Brevundimonas → Caulobacterales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 123
ATGTTGCGCCTGTTCACCGCCATTCCGATCCCCGAGGACGTCGCCGAGACCCTGGCGCGGCGTCAATCCGGCCTGCCCGGCGCGCGCTGGCGGCCGCTGGACGCCCTGCACGTCACCCTGGCC
PROTEIN sequence
Length: 41
MLRLFTAIPIPEDVAETLARRQSGLPGARWRPLDALHVTLA