ggKbase home page

scnpilot_solids1_trim150_scaffold_31760_curated_2

Organism: solids_Brevundimonas_1

near complete RP 43 / 55 MC: 1 BSCG 45 / 51 MC: 1 ASCG 7 / 38 MC: 2
Location: comp(518..826)

Top 3 Functional Annotations

Value Algorithm Source
transcriptional regulator n=1 Tax=alpha proteobacterium L41A RepID=UPI000378F6A6 similarity UNIREF
DB: UNIREF100
  • Identity: 93.1
  • Coverage: 102.0
  • Bit_score: 189
  • Evalue 2.00e-45
Integration host factor subunit alpha {ECO:0000256|HAMAP-Rule:MF_00380, ECO:0000256|RuleBase:RU004485}; Short=IHF-alpha {ECO:0000256|HAMAP-Rule:MF_00380};; TaxID=1628191 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas sp. KM4.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 93.1
  • Coverage: 102.0
  • Bit_score: 189
  • Evalue 2.80e-45
integration host factor subunit alpha; K04764 integration host factor subunit alpha similarity KEGG
DB: KEGG
  • Identity: 89.9
  • Coverage: 99.0
  • Bit_score: 172
  • Evalue 7.90e-41

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Brevundimonas sp. KM4 → Brevundimonas → Caulobacterales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 309
GTGGCCGGACATCAGACGCTTACCCGTGCGGATTTGTGCGAAGCGGTCCACGAAGAGGTCGGGTTGTCCCGGCAGGAATGCTCCGGACTGGTCGAGCGCACGCTGGACCTGATCGTCGACTCTCTTGAGCAGGGCGAGACGGTCAAACTGTCGGGCTTCGGCGTCTTCCAGGTCCGCGAGAAACGCGCCCGCATGGGCCGCAACCCCAAGACCGGCGAACCGGCCGCCATCAACCCCCGCCGCGTCATCAGCTTCCGCGCCTCACAGATCATGAAGAGCCGGGTGCACGACGCCGTCGTCGAGACCTGA
PROTEIN sequence
Length: 103
VAGHQTLTRADLCEAVHEEVGLSRQECSGLVERTLDLIVDSLEQGETVKLSGFGVFQVREKRARMGRNPKTGEPAAINPRRVISFRASQIMKSRVHDAVVET*