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scnpilot_solids1_trim150_scaffold_37757_curated_2

Organism: solids_Burkholderiales_2

partial RP 32 / 55 BSCG 32 / 51 MC: 1 ASCG 10 / 38
Location: comp(607..1110)

Top 3 Functional Annotations

Value Algorithm Source
Putative ABC transporter, branched-chain amino acid-binding protein n=1 Tax=Variovorax paradoxus B4 RepID=T1XI30_VARPD similarity UNIREF
DB: UNIREF100
  • Identity: 63.9
  • Coverage: 166.0
  • Bit_score: 223
  • Evalue 2.00e-55
putative ABC transporter, branched-chain amino acid-binding protein similarity KEGG
DB: KEGG
  • Identity: 63.9
  • Coverage: 166.0
  • Bit_score: 223
  • Evalue 6.40e-56
Putative ABC transporter, branched-chain amino acid-binding protein {ECO:0000313|EMBL:AGU52171.1}; TaxID=1246301 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus B4.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 63.9
  • Coverage: 166.0
  • Bit_score: 223
  • Evalue 2.80e-55

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 504
GGCTGCGACCTGGTGACGCTGGGCGGCGTGATCCGCGAGACCATAGGCACCGTGGCCACCTCCAAGAAGATGGGCTACACCCCGGTGTTCCTGGGTTCGGCCGCGTCGTACAGCGAGCTCATCCCCAAGCTCGGCGGCAAGGCCATGGACGGCCTCTACGCCACGATGGCCGCGCAGGTGCCCTACACCGATGACGCGAGCAACAAGCCGCTCGCGTTCTGGGCTACCAAGTACAAGACCAAGTTCAACGAGGACGGCGGCATCTTCTCGGCCTATGGCTACATCGTCATGGACATGTTCCTGCAGGCCGTCGCCAAGGCCGGGCCCAACCTGACGACCGACGCCTTCATCAAGACCATGGACGGCATGACTTATCCGACCGACATCTTCGGCAGCGCCCCCGCGCATTACACCGCCAACAACCACCTGGGCAGCACCGCCTGGCGCCTGTCGCAGGTCGAGGACGGCAAGTGGAAGGTGGTCTCGCCCTACCACACCAAGTAG
PROTEIN sequence
Length: 168
GCDLVTLGGVIRETIGTVATSKKMGYTPVFLGSAASYSELIPKLGGKAMDGLYATMAAQVPYTDDASNKPLAFWATKYKTKFNEDGGIFSAYGYIVMDMFLQAVAKAGPNLTTDAFIKTMDGMTYPTDIFGSAPAHYTANNHLGSTAWRLSQVEDGKWKVVSPYHTK*