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scnpilot_solids1_trim150_scaffold_820_curated_11

Organism: solids_Burkholderiales_2

partial RP 32 / 55 BSCG 32 / 51 MC: 1 ASCG 10 / 38
Location: 11912..12298

Top 3 Functional Annotations

Value Algorithm Source
TrbC-like protein n=1 Tax=Pseudomonas aeruginosa BWHPSA007 RepID=U9P3Q5_PSEAI similarity UNIREF
DB: UNIREF100
  • Identity: 93.8
  • Coverage: 128.0
  • Bit_score: 226
  • Evalue 1.80e-56
Conjugal transfer protein TrbC {ECO:0000313|EMBL:KIL06313.1}; TaxID=316 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas stutzeri (Pseudomonas perfectomarina).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 93.8
  • Coverage: 128.0
  • Bit_score: 224
  • Evalue 7.50e-56
conjugal transfer protein trbc; K03197 type IV secretion system protein VirB2 similarity KEGG
DB: KEGG
  • Identity: 93.0
  • Coverage: 128.0
  • Bit_score: 223
  • Evalue 4.90e-56

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Taxonomy

Pseudomonas stutzeri → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 387
ATGATGCACGTTCCTGCTTTCCGTATTTCTGCAAATGCGCTTCCCGGCCGTTCCAGTTCGGCTCGGCTGGATGGCCTGACCCGCCCGGCCATGCAGGGCCTGATGCTCGCGGCGCTGATGCTGCTGCTCGCGGGCACCGCGCAGGCCGCGGGTTCGTCGATGCCTTGGGAAGGTCCATTGCAGTCGATCTTGGAGTCGATCCAGGGGCCGGTGGCGCGCATCGTCGCGGTCATCATCATCATCGCCACGGGCCTCGCGCTGGCCTTCGGCGACACGAGCGGGGGCTTTCGCAAGCTGATCCAGATCGTGTTCGGTCTGTCCATCGCCTTCGCGGCTTCGAGCTTTTTCCTGTCCTTCTTCAGCTTCTCGGGCGGGGCCGTCGTATGA
PROTEIN sequence
Length: 129
MMHVPAFRISANALPGRSSSARLDGLTRPAMQGLMLAALMLLLAGTAQAAGSSMPWEGPLQSILESIQGPVARIVAVIIIIATGLALAFGDTSGGFRKLIQIVFGLSIAFAASSFFLSFFSFSGGAVV*