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scnpilot_solids1_trim150_scaffold_820_curated_18

Organism: solids_Burkholderiales_2

partial RP 32 / 55 BSCG 32 / 51 MC: 1 ASCG 10 / 38
Location: 18955..20238

Top 3 Functional Annotations

Value Algorithm Source
conjugative transfer protein TrbI n=1 Tax=Pseudomonas aeruginosa RepID=UPI00030BCCBA similarity UNIREF
DB: UNIREF100
  • Identity: 93.0
  • Coverage: 427.0
  • Bit_score: 791
  • Evalue 3.60e-226
Type IV secretion system protein virB10 {ECO:0000313|EMBL:AKC05781.1}; TaxID=287 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 93.0
  • Coverage: 427.0
  • Bit_score: 791
  • Evalue 5.10e-226
conjugation TrbI family protein; K03195 type IV secretion system protein VirB10 similarity KEGG
DB: KEGG
  • Identity: 90.4
  • Coverage: 427.0
  • Bit_score: 764
  • Evalue 2.00e-218

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Taxonomy

Pseudomonas aeruginosa → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1284
ATGAGCCAGGATGACATTTCCGACCATGCCGCCCCGCAGGCCGACAAGGTGGCACCCGAGGCGGTGGCGTTGCGCGCCCAGCCGCGCCCGGTTACGCGCCTGAACCGGCGCACGCTGGCCATCCTCGCCGGCAGCCTGTCGGTTGCCGTGCTCGGCGCGCTGATGTGGTCGTTGCAACCGCATCGGCGTGGCGTAGGCGAGCAGACCGAGCTTTACAACGTGGATCGCGTCTCGAAGTCCGAAGGGCTGGATGGCCTGCCGTCGGACTACTCGAAGCTGCCGGCGAAGGTGCCGGAACTGGGGCCGCCCCTGCCGGGCGACCTCGGCCCGGCCATCGTGGCCTCGCAGCAGCCGGTCACACCCACCTATGCGCCGCCAGGCCACGACCCGGAGGATGCACGGCGCAAGGAAGCCGATGCCGCGGCGGCTTCGTCGGTGTTCTTCCGTTCGAGTCAGCAGGGCAAGGCCGGTGCGCCGGCAACTGCGCAAGTCGCGGCGGCAGGCCCGGTATCGGCCTTGGCGGGTTTCGATCCGCTCGCCGCCGGGCCGGCCTCGACGGCGGCACAAACTCAACAGTCCGCGTCTGACCCGACCGCTGTGCAAAACCGGCAAGACCAGAAAGAGGCTTTCCTGAAAGGCGGTTCTACGGAAACCCGCAATTCCGGGAATCTGGCGCTGCCTACCTCGCCGTACCAGGTGATGGCGGGCACTGTGATCGCCGGCGCGCTGGTGACCGGCATCAAGTCCGACCTGCCGGGCGACGTGATCAGCACGGTGACGGAGCCAGTCTACGACACTGCCACGGGCAAGTTCCTGTTGATCCCGCAAGGCTCGCGCATCCTGGGCAAGTACAACAGCCAGGTGAGCTATGGGCAGAGCCGCGTGCAGGTGGTGTGGAACCGCATCATCCTGCCCGACACGTCTTCGCTGAAGCTCGACAACCTCGCGGGCGCCGATCCGGCCGGCTATGCCGGCCTGGAGGATGGGGTCGATTGGCATTGGGATCGTGTCTTTGCCGGCGCGGCGCTGACCACGCTGCTGGGCGTGGGCGCCGAACTGGCCGCGCCGCAGAACCGGCAGGACGGCAATCGCGTCGTGATTGCCGGGCAAGGTAGTCTGCAGGACAGCGTGAACCAGGTGGGCCAGGAGATGACCCGGCGCAACATGAACATCCAGCCAACGCTGACCGAGCGGCCCGGCCTGCCGGTTCGCATCATCGTCAACCGCGATCTGGTGCTGCGACCGTACCAGCCGCTGTTCTTCAACCGGGGAGCAATGCGATGA
PROTEIN sequence
Length: 428
MSQDDISDHAAPQADKVAPEAVALRAQPRPVTRLNRRTLAILAGSLSVAVLGALMWSLQPHRRGVGEQTELYNVDRVSKSEGLDGLPSDYSKLPAKVPELGPPLPGDLGPAIVASQQPVTPTYAPPGHDPEDARRKEADAAAASSVFFRSSQQGKAGAPATAQVAAAGPVSALAGFDPLAAGPASTAAQTQQSASDPTAVQNRQDQKEAFLKGGSTETRNSGNLALPTSPYQVMAGTVIAGALVTGIKSDLPGDVISTVTEPVYDTATGKFLLIPQGSRILGKYNSQVSYGQSRVQVVWNRIILPDTSSLKLDNLAGADPAGYAGLEDGVDWHWDRVFAGAALTTLLGVGAELAAPQNRQDGNRVVIAGQGSLQDSVNQVGQEMTRRNMNIQPTLTERPGLPVRIIVNRDLVLRPYQPLFFNRGAMR*