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scnpilot_solids1_trim150_scaffold_5450_curated_4

Organism: solids_Burkholderiales_2

partial RP 32 / 55 BSCG 32 / 51 MC: 1 ASCG 10 / 38
Location: comp(3506..3709)

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit omega; K03060 DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] similarity KEGG
DB: KEGG
  • Identity: 98.5
  • Coverage: 67.0
  • Bit_score: 131
  • Evalue 7.80e-29
DNA-directed RNA polymerase subunit omega {ECO:0000256|HAMAP-Rule:MF_00366, ECO:0000256|SAAS:SAAS00054253}; Short=RNAP omega subunit {ECO:0000256|HAMAP-Rule:MF_00366};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00366, ECO:0000256|SAAS:SAAS00094401};; RNA polymerase omega subunit {ECO:0000256|HAMAP-Rule:MF_00366}; Transcriptase subunit omega {ECO:0000256|HAMAP-Rule:MF_00366}; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphi similarity UNIPROT
DB: UniProtKB
  • Identity: 98.5
  • Coverage: 67.0
  • Bit_score: 131
  • Evalue 3.50e-28
DNA-directed RNA polymerase subunit omega n=4 Tax=Comamonadaceae RepID=RPOZ_ACIET similarity UNIREF
DB: UNIREF100
  • Identity: 98.5
  • Coverage: 67.0
  • Bit_score: 131
  • Evalue 2.50e-28

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Taxonomy

Alicycliphilus denitrificans → Alicycliphilus → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 204
ATGGCTCGCATCACCGTGGAAGATTGCCTTGAGCAAATTCCCAATCGTTTTCAGCTCGTGCTGGCGGCCACCTATCGGGCGCGCATGCTCAGCCAGGGCCATGCCCCGAAGATCGAAAGCCGCAACAAACCAGGCGTGACCGCGCTGCGTGAAATTGCCGCGGGCAAGGTGGGTCTGGAGATGCTGAAAAAAGTCCCCGGTTGA
PROTEIN sequence
Length: 68
MARITVEDCLEQIPNRFQLVLAATYRARMLSQGHAPKIESRNKPGVTALREIAAGKVGLEMLKKVPG*