ggKbase home page

scnpilot_solids1_trim150_scaffold_18549_curated_1

Organism: solids_Burkholderiales_2

partial RP 32 / 55 BSCG 32 / 51 MC: 1 ASCG 10 / 38
Location: comp(3..269)

Top 3 Functional Annotations

Value Algorithm Source
H1 histone (Fragment) n=1 Tax=Astyanax altiparanae RepID=F4ZHC6_9TELE similarity UNIREF
DB: UNIREF100
  • Identity: 48.1
  • Coverage: 77.0
  • Bit_score: 57
  • Evalue 6.00e-06
Poly(3-hydroxyalkanoate) granule-associated protein PhaF {ECO:0000313|EMBL:KJU75999.1}; TaxID=330 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas oleovorans/pseudoalcaligenes group.;" source="Pseudomonas pseudoalcaligenes.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 46.4
  • Coverage: 84.0
  • Bit_score: 60
  • Evalue 1.30e-06
histone H1-like similarity KEGG
DB: KEGG
  • Identity: 44.9
  • Coverage: 89.0
  • Bit_score: 57
  • Evalue 2.40e-06

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Pseudomonas pseudoalcaligenes → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 267
ATGCCAGCTCGAAAGTCCGCCGCGCCCGCAACCGATGGCGCCAGCGCCAAAAAGTCCAAGGCCAGTGCCGAAGCAGAAGAAAAACTGACCAAAAAACCTGCCAAGAAGGCTGAAACGCAGGCGGCGAAGAAGCCTGCCGCCGCCAAGAAACCTGCTTCCGACAGCCAGGACAAGCCCGCCAAGGCCACCAAGGCCAAGGTGGAGCCCGCGGCCAGGGGCAAGGGCAAGGCAAAAGCCAAGGGCAAGACGAAGGACGACTTTCAGGAC
PROTEIN sequence
Length: 89
MPARKSAAPATDGASAKKSKASAEAEEKLTKKPAKKAETQAAKKPAAAKKPASDSQDKPAKATKAKVEPAARGKGKAKAKGKTKDDFQD