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scnpilot_solids1_trim150_scaffold_9353_curated_1

Organism: solids_Burkholderiales_2

partial RP 32 / 55 BSCG 32 / 51 MC: 1 ASCG 10 / 38
Location: 1..1620

Top 3 Functional Annotations

Value Algorithm Source
transcription-repair coupling factor; K03723 transcription-repair coupling factor (superfamily II helicase) [EC:3.6.4.-] similarity KEGG
DB: KEGG
  • Identity: 85.7
  • Coverage: 539.0
  • Bit_score: 920
  • Evalue 3.50e-265
Transcription-repair-coupling factor {ECO:0000256|HAMAP-Rule:MF_00969}; Short=TRCF {ECO:0000256|HAMAP-Rule:MF_00969};; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00969};; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 85.7
  • Coverage: 539.0
  • Bit_score: 920
  • Evalue 1.60e-264
Transcription-repair-coupling factor n=1 Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8TRG9_ALIDB similarity UNIREF
DB: UNIREF100
  • Identity: 85.7
  • Coverage: 539.0
  • Bit_score: 920
  • Evalue 1.10e-264

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Taxonomy

Alicycliphilus denitrificans → Alicycliphilus → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1620
ATCCAGGACATGATCAGCCCGCGCCCCATGGATCGCCTCGTGTGCGGCGACGTGGGCTTCGGCAAGACCGAGGTGGCGCTGCGCGCGGCCTTCATCGCGGTCACGGGCAGCAAGCAGGTGGCGCTGCTCGCGCCCACTACGCTGCTCGCGGAGCAGCACTACCAGACGCTGGTGGACCGCTTCGCGCGCTGGCCGGTGAAGGTGGCCCAGGTGAGCCGCTTTGCCTCAGGCAAGGAGGCCACGGCCGCGCTCAAGGGCCTGGCGGAAGGCAGCGTGGACATCGTCGTCGGCACGCACAAGCTGCTCTCGCCCTCGACGAAGTTCAAGAACCTGGGGCTGCTCATCATCGACGAGGAGCACCGCTTCGGCGTGCGCCACAAGGAGGCCATGAAGGCCATGCGCGCCGAGGTGGACGTGCTCACGCTCACCGCCACGCCGATCCCGCGCACCATGGGCATGGCGCTGGAAGGCCTTCGCGACCTGTCCGTCATCGCCACCGCGCCGCAGCGGCGCCTGGCCATCAAGACCTTCCTGCGCGAAGAAAACCAGGGCGTGATCCGCGAAGCCGTGCTGCGCGAATTGAAGCGCGGCGGGCAGGTGTACTTCCTGCACAACGAGGTCGAAACCATAGAAAACCGGCGTGAGCGCCTGCAGGAAATCCTGCCTGAGGCACGCATTGCCGTCGCGCACGGCCAGATGCCCGAGCGCCAGCTCGAACATGTGATGCGCGACTTCATCGCCCAGCGCACCAACGTGCTGCTGTGCTCGACCATCATCGAGACCGGCATCGACGTGCCCACGGCCAACACCATCCTGATCTCGCGCGCCGACAAGTTCGGCCTGGCGCAGCTGCACCAGCTGCGCGGGCGCGTGGGGCGCAGCCACCATCAAGCCTACGCTTACCTCATGGTGCCGGACGTGCGCGGCCTCAGGGGACATGCGGCGCAGCGCCTGGAGGCGATCCAGCAAATGGAGGAACTGGGCAGCGGCTTCTACCTGGCCATGCACGACCTGGAAATCCGCGGCGCGGGCGAGGTGCTGGGCGAAAACCAGTCGGGCAACATGATCGAGGTGGGCTTTCAGCTCTACAACGAGATGCTGGCCGAGGCCGTGCGCAGCCTGAAGGCAGGCAAGGAGCCCGACCTGCTGGCGCCGATGCAGGCAACGACCGACATCAACCTGCACGCCCCGGCGCTGCTGCCCAGCGACTACTGCGCCGACGTGCAGACGCGCCTGTCGCTCTACAAACGGCTGGCCACCGCGCGCACCAGCGATCAGATCGACACGCTGCTCGAAGAAATCGTGGACCGCTTCGGCAAGCTCCCGGCCCAGACGCAGACCCTCGTCGACGTGCACCGCTTGCGCGTGCTGTGCGCACCCTACGGCGTGACCAAGGTGGACGCGGCACCGGGCGTGATCACCATCAGCTTCGTGCCGCAGCCGCCGATCGATCCCATGTCCATCATCCGGCTGGTGCAGAAAAACCGCGACATCAAGCTCGCGGGCAATGAGAAGCTGCGCATCGAGCGCCAGCTCCCCGAACCGATGCAGCGCGCGCAGATGGTGCGCGACCTGCTGCGCGGCCTGGGCGAGCCGATGAAGGAGGCGGTGGCCGCGTGA
PROTEIN sequence
Length: 540
IQDMISPRPMDRLVCGDVGFGKTEVALRAAFIAVTGSKQVALLAPTTLLAEQHYQTLVDRFARWPVKVAQVSRFASGKEATAALKGLAEGSVDIVVGTHKLLSPSTKFKNLGLLIIDEEHRFGVRHKEAMKAMRAEVDVLTLTATPIPRTMGMALEGLRDLSVIATAPQRRLAIKTFLREENQGVIREAVLRELKRGGQVYFLHNEVETIENRRERLQEILPEARIAVAHGQMPERQLEHVMRDFIAQRTNVLLCSTIIETGIDVPTANTILISRADKFGLAQLHQLRGRVGRSHHQAYAYLMVPDVRGLRGHAAQRLEAIQQMEELGSGFYLAMHDLEIRGAGEVLGENQSGNMIEVGFQLYNEMLAEAVRSLKAGKEPDLLAPMQATTDINLHAPALLPSDYCADVQTRLSLYKRLATARTSDQIDTLLEEIVDRFGKLPAQTQTLVDVHRLRVLCAPYGVTKVDAAPGVITISFVPQPPIDPMSIIRLVQKNRDIKLAGNEKLRIERQLPEPMQRAQMVRDLLRGLGEPMKEAVAA*