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scnpilot_solids1_trim150_scaffold_3777_curated_4

Organism: solids_Burkholderiales_2

partial RP 32 / 55 BSCG 32 / 51 MC: 1 ASCG 10 / 38
Location: comp(2345..2656)

Top 3 Functional Annotations

Value Algorithm Source
Phage transcriptional regulator, AlpA n=1 Tax=Variovorax paradoxus (strain S110) RepID=C5CXN0_VARPS similarity UNIREF
DB: UNIREF100
  • Identity: 61.5
  • Coverage: 78.0
  • Bit_score: 96
  • Evalue 2.30e-17
phage transcriptional regulator AlpA similarity KEGG
DB: KEGG
  • Identity: 61.5
  • Coverage: 78.0
  • Bit_score: 96
  • Evalue 7.30e-18
Phage transcriptional regulator, AlpA {ECO:0000313|EMBL:ACS18886.1}; TaxID=543728 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain S110).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 61.5
  • Coverage: 78.0
  • Bit_score: 96
  • Evalue 3.20e-17

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 312
ATGCCGCATACGCGAGACTCCGCCGCTTCGTCATCCGACGCCGAGCCTGCGTTCTACCGCCTGGCCGACGTGATCCGCATCACGGCGCTGAGCCGATCGAGCATCTACCGGCGCATCGCCGCCGGCGAATTCCCGCCGCAGGTATCGCTCGGCGGCCGTGCGACAGGCTGGCGCCGCGAAGCTCTGCAAGCATGGATCGGCGACCCTTCGGGCTTTCGCCCGCTGACCACGGCCAAGGTGAGGCATACGTCGTCCGGCGCCCGCGTCCGGCATATCGCCGCCCCTGCCGAATCACAGTTTAGGCATGGGTGA
PROTEIN sequence
Length: 104
MPHTRDSAASSSDAEPAFYRLADVIRITALSRSSIYRRIAAGEFPPQVSLGGRATGWRREALQAWIGDPSGFRPLTTAKVRHTSSGARVRHIAAPAESQFRHG*