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scnpilot_solids1_trim150_scaffold_24468_curated_3

Organism: solids_Burkholderiales_2

partial RP 32 / 55 BSCG 32 / 51 MC: 1 ASCG 10 / 38
Location: comp(1790..1930)

Top 3 Functional Annotations

Value Algorithm Source
Transcription termination factor Rho {ECO:0000256|HAMAP-Rule:MF_01884}; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_01884};; ATP-dependent helicase Rho {ECO:0000256|HAMAP-Rule:MF_01884}; TaxID=232721 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. (strain JS42).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 93.5
  • Coverage: 46.0
  • Bit_score: 89
  • Evalue 1.00e-15
transcription termination factor Rho n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI00035E4AB8 similarity UNIREF
DB: UNIREF100
  • Identity: 93.5
  • Coverage: 46.0
  • Bit_score: 89
  • Evalue 7.50e-16
rho; transcription termination factor rho; K03628 transcription termination factor Rho similarity KEGG
DB: KEGG
  • Identity: 93.5
  • Coverage: 46.0
  • Bit_score: 89
  • Evalue 2.40e-16

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Taxonomy

Acidovorax sp. JS42 → Acidovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 141
GAGATCCTGCAGAAGACCCGCATCCTGCGCCAGTTCATGTACAACATGGACGAGATCGAATCGATGGAGCTCATGATCAAGAAAATGCGCGAGACCAAGAGCAACGTCGATTTCTTCGAAGCCATGCGCCGGGGCGGCTGA
PROTEIN sequence
Length: 47
EILQKTRILRQFMYNMDEIESMELMIKKMRETKSNVDFFEAMRRGG*