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scnpilot_solids1_trim150_scaffold_758_curated_8

Organism: solids_Burkholderiales_3

partial RP 13 / 55 BSCG 18 / 51 ASCG 5 / 38
Location: comp(5417..6121)

Top 3 Functional Annotations

Value Algorithm Source
Conjugal transfer protein TrbF n=3 Tax=Pseudomonas aeruginosa RepID=U8EG63_PSEAI similarity UNIREF
DB: UNIREF100
  • Identity: 95.3
  • Coverage: 234.0
  • Bit_score: 456
  • Evalue 1.50e-125
Conjugal transfer protein TrbF {ECO:0000313|EMBL:KGE69516.1}; TaxID=1324332 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens LMG 5329.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 95.3
  • Coverage: 234.0
  • Bit_score: 456
  • Evalue 2.10e-125
conjugal transfer protein TrbF; K03200 type IV secretion system protein VirB5 similarity KEGG
DB: KEGG
  • Identity: 92.3
  • Coverage: 234.0
  • Bit_score: 444
  • Evalue 2.50e-122

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Taxonomy

Pseudomonas fluorescens → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 705
ATGCGATTCAAACGACCACGGGTGCGCTATGCCGATACGCCGCAGCCTGCCACCCCGTACCAAGCTGCCGCGCAGGTTTGGGATGAACGCATCGGGTCGGCCCGCGTGCAGGCGAAGAACTGGCGGCTGACTGCGTTTGGCTGTCTCGTGCTCGCGCTGCTGATGGCCGGCGGCTTGGTCTGGCGCTCGGCGCAGTCCATCGTCACACCCTATGTCGTTGAGGTGGACAAGACCGGCCAGGTGCGTGCGGTCGGCGAAGCCGCCACGCCGTACCGGCCGGCCGATGCACAGATCGCCTACCACCTCGCGCACTTCATCACGCTGGTGCGCTCACTCTCCATCGATCCGGTTGTGGTGCGGCAGAACTGGCTCGATGCCTACGACTACACCACCGATCACGGTGCCGCCGTGCTCAACGACTACGCCAGCAAGAACGACCCGTTTGCCCGGGTCGGCAAGGAATCGGTAACGGTGCAGATCACCAGCGTCACGCGCGCCAGTGATTCGTCATTCAACGTGCGCTGGACGGAGCAGCGGTTCGTCAACGGTGCGCCGGCTAGCACCGAGCGTTGGAACGCCGTGGTGTCCATCGTCCTGCAAACCCCGCATACCGAGCAGCGTCTGCGCAAGAACCCCCTGGGCATCTACGTCAACGGCCTGTCGTGGAGCCGCGAGCTGGATGTATCCGAAGGAGCCAAGCCATGA
PROTEIN sequence
Length: 235
MRFKRPRVRYADTPQPATPYQAAAQVWDERIGSARVQAKNWRLTAFGCLVLALLMAGGLVWRSAQSIVTPYVVEVDKTGQVRAVGEAATPYRPADAQIAYHLAHFITLVRSLSIDPVVVRQNWLDAYDYTTDHGAAVLNDYASKNDPFARVGKESVTVQITSVTRASDSSFNVRWTEQRFVNGAPASTERWNAVVSIVLQTPHTEQRLRKNPLGIYVNGLSWSRELDVSEGAKP*