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scnpilot_solids1_trim150_scaffold_21822_curated_3

Organism: solids_Burkholderiales_3

partial RP 13 / 55 BSCG 18 / 51 ASCG 5 / 38
Location: 1321..1635

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase subunit sigma-24 n=3 Tax=Pseudomonas aeruginosa RepID=U5AMK5_PSEAI similarity UNIREF
DB: UNIREF100
  • Identity: 86.7
  • Coverage: 105.0
  • Bit_score: 183
  • Evalue 1.10e-43
RNA polymerase subunit sigma-24 {ECO:0000313|EMBL:AHB76830.1}; TaxID=1380774 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea sp. RB-44.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 81.9
  • Coverage: 105.0
  • Bit_score: 175
  • Evalue 5.50e-41
ECF subfamily RNA polymerase sigma-24 factor similarity KEGG
DB: KEGG
  • Identity: 80.0
  • Coverage: 105.0
  • Bit_score: 171
  • Evalue 1.80e-40

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Taxonomy

Pandoraea sp. RB-44 → Pandoraea → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 315
ATGGGCACCCCCGTTGGCGACCGCGACAATTTGATCATGGCGGTACAGACCGGAGACACGACCGCCCTCTCCCGTTTGCTGGTGGTGTGCCAGGCCGATGCGCGCCGCTATGCGTACAAGCACTGCCATGCGAGCGATGTGGATGACGCGGTTCAGGAATCGCTGCTCATCATTTCCCGCAAGGTCAGCGGGCTCAAAGCGGCGGCTGCCTTTTCGTCGTGGCTGTTCACGGTCATCAAGCACGAATGCCGCAAGCTCGCGCGCATGATGCTCAAGCGCGAGCCCTTACCCGATGAAATGGCCGAGGAACTGCTG
PROTEIN sequence
Length: 105
MGTPVGDRDNLIMAVQTGDTTALSRLLVVCQADARRYAYKHCHASDVDDAVQESLLIISRKVSGLKAAAAFSSWLFTVIKHECRKLARMMLKREPLPDEMAEELL