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scnpilot_solids1_trim150_scaffold_3_curated_30

Organism: solids_Castellaniella_1

near complete RP 52 / 55 BSCG 51 / 51 ASCG 13 / 38
Location: comp(26727..28739)

Top 3 Functional Annotations

Value Algorithm Source
DNA topoisomerase {ECO:0000256|RuleBase:RU000518, ECO:0000256|SAAS:SAAS00046608}; EC=5.99.1.2 {ECO:0000256|RuleBase:RU000518, ECO:0000256|SAAS:SAAS00046608};; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella defragrans 65Phen.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 88.1
  • Coverage: 670.0
  • Bit_score: 1190
  • Evalue 0.0
DNA topoisomerase III (EC:5.99.1.2) similarity KEGG
DB: KEGG
  • Identity: 87.8
  • Coverage: 670.0
  • Bit_score: 1188
  • Evalue 0.0
DNA topoisomerase n=1 Tax=Pseudomonas aeruginosa WC55 RepID=T5KYD4_PSEAI similarity UNIREF
DB: UNIREF100
  • Identity: 88.4
  • Coverage: 670.0
  • Bit_score: 1197
  • Evalue 0.0

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Taxonomy

Castellaniella defragrans → Castellaniella → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2013
ATGCGGCTGTTCTTGTGCGAGAAGCCCTCCCAGGGCAAGGACATTGGCCGGATTCTCGGCGCGACCCAGCGCGGTGAAGGCTATCTCAGCGGCTCCGGTGTCACCGTCACCTGGTGCATCGGCCATCTCGTAGAAGTGGCAGCCCCAGAGGTCTATGACGCGGCGCTCAAGCGCTGGTCGCTGGAGCAGTTGCCCATCATTCCCCAGCAATGGCGGGTCGAGGTCAAACCGAAGACCGCCACGCAGTTCAAGGTCGTCAAAGGGCTTTTGGCGAAAGCGACCCATCTCGTCATCGCCACCGATGCGGATCGCGAAGGTGAGCTGATCGCCCGCGAGATCATCGACCTGTGCGGCTACCGCGGCCCCATAGAGCGGCTCTGGCTGTCGGCGCTCAATGATGCGTCGATCCGCACGGCGCTCGGAAAACTGCGGCCCTCGGCCGAGACGCTGCCGATGTACTACTCGGCTCTGGCGCGCTCGCGAGCCGACTGGCTCGTCGGTATGAACCTCAGCCGCCTATTTACCGTACTCGGAAGACGGGTGGGTTATAACGGCGTGCTGTCCGTCGGGCGCGTCCAGACGCCGACACTTAGGCTTGTCGTGGATCGCGACCGCGAGATTGAAGCTTTCAAATCGGTGCCCTACTGGGCCATCGACATATCCTTGTCCGCAGGCAGTCAGGCGTTCATCGCGCAGTGGGTTGCCCCCGATGGCTGCACCGATGGCGTCGGACGTTGCCTGCAGCAACCTACTGCGTGGCAAGCCGCACAGCAGATTCGAACTGCGGGCAATGCTCAGGTGGAGTCGGTGGAGACTGAGCGCGTGCGCGAAGGTCCGCCGCTGCCGTTCGACCTGGGTACCTTGCAGGAAATTTGTTCCAAACAGCTTGGACTGGACGTTCAGGAAACCCTGGAGGTCGCCCAGGCCCTGTACGAAGCACACAAGGCTACGACGTACCCGCGTTCGGATTCCGGCTATTTGCCCGAAAGCATGTTCGTCGAGGCACCCACGGTTCTCGACAGCCTGATGAAGACCGATCCCTCGCTGCGCCCGATCATGGACCAGCTCGACCGCTCCCAGCACTCGCGTGCCTGGAATGACAGTAAGGTCACGGCGCACCACGGCATTATTCCGACGCTCGAACCGGTGAACCTCTCGGCCATGAGCGAGAAGGAACTTGCGGTGTACAGGCTGGTCCGGGCGCACTACTTGGCTCAGTTCCTCCCTCATCACGAGTTCGATCGCACCATAGCACAGTTCGCTTGTGGCCAGCAGATGCTGGCGGCGACGGGCAAGCAGGTTGTCGCCAAGGGTTGGCGCCTGGTGCTCGAGGAACCTCAGCCTGACGAGGACGGCGATGCCGCGATGCGCAGTCAAGTGCTTCCCGCGTTGCGCGAGGGCTTGGCGTGCCAAGTGGCTGCAGTCGATCTGAAGGCGCTCAAGACGTTGCCGCCAAGACCGTACACGCAGGGCGAACTGGTCAAATCCATGAAGGGGGTCGCCAAGCTCGTGACAGACCCGCGCCTGAAGCAGAAGCTCAAGGATACGGTCGGCATCGGCACCGAGGCGACGCGAGCCAACATTATTAGCGGCCTGATCGCACGCGGTTATATCGTGAAGAAGGGGCGCGCCATCCGAGCATCGGATGCGGCCTTCACTCTGATCGACGCCGTGCCCGCTGCGATCGCTGACCCGGGCATGACCGCCATCTGGGAACAGGCGCTCGACATGATTGAATCCGGTCAGCTCACGCTGGACGTATTCATCGCAAAACAGGCAGCGTGGATTTCGCAGTTGATTGAGCAATACGGCAACGCGTCCCTGTCCATCAAGGCTACCCAAGGCCCGGCGTGTCCGTATTGCGGGGCGGCCACTCGCCAGCGCACTGGCAAGAGCGGCCCGTTCTGGTCGTGCAGTCGCTACCCCGACTGCAAAGGCACGCTGCCGGTCGAATCCGGCGCGTCCAAGCAGCGTGTCACGCGTGCGCGCCGCATTAACCGAAAGGGCTCCTGA
PROTEIN sequence
Length: 671
MRLFLCEKPSQGKDIGRILGATQRGEGYLSGSGVTVTWCIGHLVEVAAPEVYDAALKRWSLEQLPIIPQQWRVEVKPKTATQFKVVKGLLAKATHLVIATDADREGELIAREIIDLCGYRGPIERLWLSALNDASIRTALGKLRPSAETLPMYYSALARSRADWLVGMNLSRLFTVLGRRVGYNGVLSVGRVQTPTLRLVVDRDREIEAFKSVPYWAIDISLSAGSQAFIAQWVAPDGCTDGVGRCLQQPTAWQAAQQIRTAGNAQVESVETERVREGPPLPFDLGTLQEICSKQLGLDVQETLEVAQALYEAHKATTYPRSDSGYLPESMFVEAPTVLDSLMKTDPSLRPIMDQLDRSQHSRAWNDSKVTAHHGIIPTLEPVNLSAMSEKELAVYRLVRAHYLAQFLPHHEFDRTIAQFACGQQMLAATGKQVVAKGWRLVLEEPQPDEDGDAAMRSQVLPALREGLACQVAAVDLKALKTLPPRPYTQGELVKSMKGVAKLVTDPRLKQKLKDTVGIGTEATRANIISGLIARGYIVKKGRAIRASDAAFTLIDAVPAAIADPGMTAIWEQALDMIESGQLTLDVFIAKQAAWISQLIEQYGNASLSIKATQGPACPYCGAATRQRTGKSGPFWSCSRYPDCKGTLPVESGASKQRVTRARRINRKGS*