ggKbase home page

scnpilot_solids1_trim150_scaffold_4_curated_8

Organism: solids_Castellaniella_1

near complete RP 52 / 55 BSCG 51 / 51 ASCG 13 / 38
Location: 5486..6001

Top 3 Functional Annotations

Value Algorithm Source
TRAP transporter, DctQ family protein n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GWN4_PUSST similarity UNIREF
DB: UNIREF100
  • Identity: 62.7
  • Coverage: 169.0
  • Bit_score: 221
  • Evalue 7.90e-55
TRAP-type transport system, small permease component, predicted N-acetylneuraminate transporter {ECO:0000313|EMBL:CDM25880.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella defragrans 65Phen.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 84.2
  • Coverage: 171.0
  • Bit_score: 295
  • Evalue 3.50e-77
TRAP transporter, DctQ family protein similarity KEGG
DB: KEGG
  • Identity: 62.7
  • Coverage: 169.0
  • Bit_score: 221
  • Evalue 2.50e-55

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Castellaniella defragrans → Castellaniella → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 516
ATGCTCAATGCCCTGACCCGATTCTCGAACGGCGTATCGTGGTGCGCTTCCCAGCTGGCCAGCGTGGCGGCGGCCGTGCTGACCCTCTCGATGGTCTATGAAGTGTTCGCCCGCTATGTGTTCGACGCGCCCACGGTCTGGGCTTTCGACATCGCCTACATGGCCAACGGCGCCGTCTTCCTGCTGGGGGTGGCCTACGTGCTGCGCGAAGACGCCCACATCCGCATCGACGTCCTGCGCAACCGCCTGCCCGCGCGCTTCAACGGCGCGGTGCAGGGAGTGGCGTACCTGCTGATCCTGGCGCCGTTCTTCGGCATGCTGTCCTGGATCGCCATGTCGCACACCTGGCGGGCCTGGGTGCGCCACGAAGTGGAAACCGTCAGCCCCTGGGCGCCGCTGATGTGGCCGTTCTATCTGCTCATCGCCATCGGCCTGGTGGCGCTGACTTTGCAGCTGGCGGCGGAAGGCCTGCGGGCCTTCTGCCGCCAGGGTCCGGACGCCAAGAAGGAACATTGA
PROTEIN sequence
Length: 172
MLNALTRFSNGVSWCASQLASVAAAVLTLSMVYEVFARYVFDAPTVWAFDIAYMANGAVFLLGVAYVLREDAHIRIDVLRNRLPARFNGAVQGVAYLLILAPFFGMLSWIAMSHTWRAWVRHEVETVSPWAPLMWPFYLLIAIGLVALTLQLAAEGLRAFCRQGPDAKKEH*