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scnpilot_solids1_trim150_scaffold_4_curated_13

Organism: solids_Castellaniella_1

near complete RP 52 / 55 BSCG 51 / 51 ASCG 13 / 38
Location: comp(10607..11542)

Top 3 Functional Annotations

Value Algorithm Source
4-hydroxyproline epimerase {ECO:0000313|EMBL:CDM25875.1}; EC=5.1.1.8 {ECO:0000313|EMBL:CDM25875.1};; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella defragrans 65Phen.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 79.0
  • Coverage: 309.0
  • Bit_score: 505
  • Evalue 6.90e-140
proline racemase; K12658 4-hydroxyproline epimerase [EC:5.1.1.8] similarity KEGG
DB: KEGG
  • Identity: 70.6
  • Coverage: 309.0
  • Bit_score: 461
  • Evalue 2.00e-127
hydroxyproline-2-epimerase n=1 Tax=Pseudomonas sp. HYS RepID=UPI00029B25DC similarity UNIREF
DB: UNIREF100
  • Identity: 72.3
  • Coverage: 310.0
  • Bit_score: 467
  • Evalue 8.80e-129

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Taxonomy

Castellaniella defragrans → Castellaniella → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 936
ATGAAACGTATTTCCATCCTGGATTCCCATACCGGCGGCGAACCCACGCGCCTGGTCCTCGACGGCTTCCCCGATCCGGGGCCGGGCGACATGGCCCAGCGCCGCGCCCGCCTGGCCGCGCAGCACGACGACTGGCGCAAGGCCGTCATCCTGGAACCGCGCGGCCACGACGTGCTGGTGGGCGCCCTGCTCTGCCCGCCGCAGGATCCCCAGGCCGCGGCCGGGGTGATCTTCTTCAACAACACCGGCTATCTGGGCATGTGCGGCCACGGCACCATCGGCCTGATCGTGTCCCTCGCCTACCTGGGGCGCATCCGGCCCGGCACGCACCGGGTCGAGACGCCGGTCGGCACCGTGGAAGCCGATCTGCATGCCGACGGCAGCGTCAGCGTGCGCAATGTCCCCGCCTACCGCCACCGCAAGGACGTCACGGTGGACGTGCCCGGGATGGGCCCCGTCACGGGCGACATCGCCTGGGGCGGAAACTGGTTCTTCCTGGTTCATGCCCCGGACAAGGTCCGCCCGGGCGCCGACACCCGGCTTCTGACCGAACAGGCGGCGGCCATCAGCGACGCCCTGGAATCCCAGGGCATCCGCGGGCGCGACGGCGCCCTGATCGATCACATCGAACTGTTCGGCCACGATCCCGAAGCCGACAGCCGCAGTTTCGTGCTGTGCCCCGGCAAGGCCTACGACCGCTCGCCCTGCGGCACCGGCACCAGCGCCAAAGTCGCCTGCCTGGCCGCCGACGGCAAGCTGCAGCCAGGCCAGATCTGGCACCAGGCCAGCATCATCGGCAGCCGCTTCCAGGCCAGCTACGAGCCGGGGCCGGACGGCACCGTCATCCCCACCATCCGGGGGCAGGCGCACATCAGCGGCGAAACGACCCTGATCCTGCAGGACGACGATCCTTTCGCCTGGGGAATCACAGCCTGA
PROTEIN sequence
Length: 312
MKRISILDSHTGGEPTRLVLDGFPDPGPGDMAQRRARLAAQHDDWRKAVILEPRGHDVLVGALLCPPQDPQAAAGVIFFNNTGYLGMCGHGTIGLIVSLAYLGRIRPGTHRVETPVGTVEADLHADGSVSVRNVPAYRHRKDVTVDVPGMGPVTGDIAWGGNWFFLVHAPDKVRPGADTRLLTEQAAAISDALESQGIRGRDGALIDHIELFGHDPEADSRSFVLCPGKAYDRSPCGTGTSAKVACLAADGKLQPGQIWHQASIIGSRFQASYEPGPDGTVIPTIRGQAHISGETTLILQDDDPFAWGITA*