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scnpilot_solids1_trim150_scaffold_15557_curated_1

Organism: solids_Castellaniella_1

near complete RP 52 / 55 BSCG 51 / 51 ASCG 13 / 38
Location: 1..990

Top 3 Functional Annotations

Value Algorithm Source
Type IV secretion system protein VirD4 n=1 Tax=Stenotrophomonas maltophilia EPM1 RepID=M3EZR8_STEMA similarity UNIREF
DB: UNIREF100
  • Identity: 87.2
  • Coverage: 329.0
  • Bit_score: 572
  • Evalue 3.50e-160
Conjugal transfer protein TraG {ECO:0000313|EMBL:KGE69525.1}; TaxID=1324332 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens LMG 5329.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 88.2
  • Coverage: 331.0
  • Bit_score: 569
  • Evalue 3.20e-159
virD4; Type IV secretion system protein VirD4; K03205 type IV secretion system protein VirD4 similarity KEGG
DB: KEGG
  • Identity: 87.7
  • Coverage: 332.0
  • Bit_score: 561
  • Evalue 1.50e-157

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Taxonomy

Pseudomonas fluorescens → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 990
GCGGAAGTCACCTCGCGCTGCGACTGGCGCATCGCCGATCTGATCGCCTCCGACCACCCCGTTTCGCTGTACCTGGTGGTGCCGCCTTCGGACATCTCGCGCACGAAGCCGCTCATCCGTTTGATCCTCAACCAGATCGGTCGGCGTCTGACCGAATCGCTCGACGGTAGCGACGGCATCGAGCGGCGCCACAAGTTGCTGCTGATGCTCGACGAGTTTCCGGCGCTTGGGCGCCTGGACTTCTTCGAGACGGCGCTGGCCTTCATGGCGGGCTACGGCATCCGCAGCTTCCTCATCGCGCAGTCGCTCAACCAGATCGACAAGGCCTACGGCCAGAACCATTCGATCCTCGACAACTGCCATGTGCGGGTGACGTTCGCCACCAACGACGAGCGCACCGCCAAGCGCATCTCCGACACGTTGGGCACCTCGACTGAGCTTCGCGCGCAGCGCAACTACGCAGGCCACCGGCTCGCACCGTGGCTCGGGCACCTGATGGTGTCGCGCCAGGAAACGGCGCGACCGCTGCTGACGCCCGGCGAGGTCATGCAGCTCCCGCCCGACGAAGCCGTGGTGATGGTGTCCAGCGTGGCGCCGATCAAGGCGAAGAAGCTGCGCTACTACGCCGACGCCAACTTCAAGCGCCGTGTGCTGCCGCCTCCGGTACTTGCCGACGAGCGCTATGCCGATACGCCGCCCGCACGGCCCGACGACTGGAGCGGGCTGGCGATTCCTGCTGTCCCGGTGGTACCGGCTGTGGACGACCTGACCGAGAGCGGTATCGGCTCGGGCACTTCCGATGACGGCGGCCTGCGCCGGCAACCGGAACTCGCCGACGTTGCCGAATACAGCCCCGAACAGCAGGCCACCGACAGCGACCTGGCGCTGCTAGATGACGACGATCCGCCGCTGCCTGGCGAGTTCAGCCCGGCCATGCAGCGTACGTCGCGATTGGCCTCACTCGATCAACACGACGGGATCGAACTATGA
PROTEIN sequence
Length: 330
AEVTSRCDWRIADLIASDHPVSLYLVVPPSDISRTKPLIRLILNQIGRRLTESLDGSDGIERRHKLLLMLDEFPALGRLDFFETALAFMAGYGIRSFLIAQSLNQIDKAYGQNHSILDNCHVRVTFATNDERTAKRISDTLGTSTELRAQRNYAGHRLAPWLGHLMVSRQETARPLLTPGEVMQLPPDEAVVMVSSVAPIKAKKLRYYADANFKRRVLPPPVLADERYADTPPARPDDWSGLAIPAVPVVPAVDDLTESGIGSGTSDDGGLRRQPELADVAEYSPEQQATDSDLALLDDDDPPLPGEFSPAMQRTSRLASLDQHDGIEL*