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scnpilot_solids1_trim150_scaffold_268_curated_4

Organism: solids_Castellaniella_1

near complete RP 52 / 55 BSCG 51 / 51 ASCG 13 / 38
Location: comp(2022..3002)

Top 3 Functional Annotations

Value Algorithm Source
ABC transporter permease n=2 Tax=Pandoraea RepID=V5UAC8_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 55.6
  • Coverage: 302.0
  • Bit_score: 337
  • Evalue 1.40e-89
Branched-chain amino acid transport system permease protein LivM {ECO:0000313|EMBL:CDM22714.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella defragrans 65Phen.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 88.4
  • Coverage: 328.0
  • Bit_score: 562
  • Evalue 3.80e-157
branched-chain amino acid transport permease; K01998 branched-chain amino acid transport system permease protein similarity KEGG
DB: KEGG
  • Identity: 52.3
  • Coverage: 306.0
  • Bit_score: 311
  • Evalue 2.60e-82

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Taxonomy

Castellaniella defragrans → Castellaniella → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 981
ATGGAATCCTCGATCATGAATGCAAGCGTGACGCGCCGTTCCGCCGGCTGGTCCTGGCCGGCCGCGCTGACGGCACTGATCTTCATCCTGCTGGCGCTGGTGCCCGTGTATGCCGGCGCCACCGACAGCCCCTATGTCCTGCTGCAGTTCAGCCGCATCCTGGTGTTCGCGCTGGCCGCCGTGGGCCTGAACCTGGCCCTGGGCTATGGCGGCCTGGTCAGCTTCGGCCATGCCATGTACATCGGCATCGGCGCCTATTGCGTCGCCATCGCCTCGCATTACGGCGCGGACAGCGGCATCCTCCACCTGCTGCTGGTGCTGGTCGTGACCGCCGTGGTGGCCGCGCCCGTGGGCCTGGTCGCCCTGCGCACGCACGGCATCGCCTTCATCATGATCACGCTGGCCCTGGCGCAGATGTTCTATTTCCTGGCCGTGGGCCTGAAGCAGTATGGCGGCGACGAGGGCCTGCCGATCCACCAGCTCAGCCGTTTCGGGGCGCTGACCGGCAGCCACGTCGGCCTGTACCTGGCCCTGCTGGCCTGCCTGGGCGCCAGCCTGCTGTTGCTGCGCCGCGTGATCCGCTCGCGCTTCGGCCTGATCCTGCGGGCCTCCAGCATGGACGCGCGGCGGGTGCGGGCGGTGGGGACTTCGCCGCTGGGGTATCGCCTGCTGGCCTACGTGCTGTCGGCCGAACTGTGCGCCCTGGCGGGGTTCTTCCTGGCCAACCTGACGTCCTTCGCGTCGCCCGCCTACATGGCGTGGACGGCATCCGGCGAACTGATCATCATGGTGCTGCTCGGCGGCGCCGGCACCCTGGTCGGACCCGTGGTGGGCGCCGCCGGCTTCCTGCTGCTGGAAGACGTCCTGAAAGGCCTGACCGATCACTGGATGATCATCATGGGCCCGGTGATCGTGCTCATTGTGCTGTTCCTGCGCAACGGGATCTGGGGCATGATCGGCTCCCCCAAGGAGGATCGCTGA
PROTEIN sequence
Length: 327
MESSIMNASVTRRSAGWSWPAALTALIFILLALVPVYAGATDSPYVLLQFSRILVFALAAVGLNLALGYGGLVSFGHAMYIGIGAYCVAIASHYGADSGILHLLLVLVVTAVVAAPVGLVALRTHGIAFIMITLALAQMFYFLAVGLKQYGGDEGLPIHQLSRFGALTGSHVGLYLALLACLGASLLLLRRVIRSRFGLILRASSMDARRVRAVGTSPLGYRLLAYVLSAELCALAGFFLANLTSFASPAYMAWTASGELIIMVLLGGAGTLVGPVVGAAGFLLLEDVLKGLTDHWMIIMGPVIVLIVLFLRNGIWGMIGSPKEDR*