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scnpilot_solids1_trim150_scaffold_144_curated_55

Organism: solids_Castellaniella_1

near complete RP 52 / 55 BSCG 51 / 51 ASCG 13 / 38
Location: 59394..60182

Top 3 Functional Annotations

Value Algorithm Source
shikimate dehydrogenase (EC:1.1.1.25) similarity KEGG
DB: KEGG
  • Identity: 59.5
  • Coverage: 262.0
  • Bit_score: 295
  • Evalue 2.10e-77
Shikimate dehydrogenase n=1 Tax=Burkholderia cepacia GG4 RepID=J7J8A2_BURCE similarity UNIREF
DB: UNIREF100
  • Identity: 59.5
  • Coverage: 262.0
  • Bit_score: 295
  • Evalue 6.60e-77
Shikimate dehydrogenase substrate binding domain protein {ECO:0000313|EMBL:KDB07080.1}; TaxID=1192124 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sp. lig30.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 59.9
  • Coverage: 262.0
  • Bit_score: 297
  • Evalue 2.40e-77

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Taxonomy

Burkholderia sp. lig30 → Burkholderia → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 789
ATGTTGAATTTATCCGGGAAGACACGGCTTTATTACATAGTGGGCGATCCTATCGCTCAGGTGAAATCGCCTGCAGGGATGACCACCGGGTTCGCCGAACGTGGCTTGGACGCGGTGGTGGTGCCTGCGCATGTCAGCCGCGAGTCGCTGGCGGATTTTTTCGCTGGCGCGAAGGCTACGAGGAACGTCGATGGCATTATCGCGACGGTGCCGCACAAATTTGGCGCCGCCGAGCAGTGTGATGAACTGAGTGAGAGGGCCCGCTTCCTTGGTTCGGCCAATGTTGCGCGGCGCATGAGCGACGGGAAGTGGTTCGGAGATCAGGTCGATGGCCTGGGGTTTGTGCAGGCCCTGCGCGATACGGGGTTCGATCTGCGCGGCAAGCGGGCGCTGTTGGTTGGGGCAGGCGGGGCGGGCTCGGCCATTGCGCAGGCGCTGCTGGATGCCGGTGTGGCGTCTCTGGGTATCTGTGATCTGGACGCTCGGCGCCTGGATCATCTGGTCGGACGCCTCGCCTCTCTGAATCTGGGGGCGGTGTCGGCGGCGTCTTCCGATCCTGCCGGGCTTGATCTGGTGGTCAATGCTACGCCCATGGGGATGCGCGCGAGCGATCCTTCGCCTGTCCGGGTGGAATCGCTGACAGCAGGCATGGCAGTGGGCGATGTAATCACGGCGCCGGCGGTGTCGCCGCTGATCAAGGCGGCGCGGACCGCCGGGTGTCGTACGGTCACAGGGCTGGAAATGTTCGCCTGCGTGGCGCGGTACATGCTGGATTTTTATACCGACTGA
PROTEIN sequence
Length: 263
MLNLSGKTRLYYIVGDPIAQVKSPAGMTTGFAERGLDAVVVPAHVSRESLADFFAGAKATRNVDGIIATVPHKFGAAEQCDELSERARFLGSANVARRMSDGKWFGDQVDGLGFVQALRDTGFDLRGKRALLVGAGGAGSAIAQALLDAGVASLGICDLDARRLDHLVGRLASLNLGAVSAASSDPAGLDLVVNATPMGMRASDPSPVRVESLTAGMAVGDVITAPAVSPLIKAARTAGCRTVTGLEMFACVARYMLDFYTD*