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scnpilot_solids1_trim150_scaffold_72_curated_26

Organism: solids_Castellaniella_1

near complete RP 52 / 55 BSCG 51 / 51 ASCG 13 / 38
Location: 28584..30206

Top 3 Functional Annotations

Value Algorithm Source
membrane protein n=1 Tax=Variovorax paradoxus RepID=UPI000374948E similarity UNIREF
DB: UNIREF100
  • Identity: 46.2
  • Coverage: 550.0
  • Bit_score: 421
  • Evalue 1.20e-114
Methyl-accepting chemotaxis protein I {ECO:0000313|EMBL:CDM25204.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella defragrans 65Phen.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 72.6
  • Coverage: 533.0
  • Bit_score: 718
  • Evalue 9.00e-204
methyl-accepting chemotaxis sensory transducer; K03406 methyl-accepting chemotaxis protein similarity KEGG
DB: KEGG
  • Identity: 46.2
  • Coverage: 532.0
  • Bit_score: 415
  • Evalue 2.80e-113

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Taxonomy

Castellaniella defragrans → Castellaniella → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1623
ATGCGCAATCTGAAAATCAGCACCCGACTGACCCTGAGCTTCAGTTTCGTGGTGATCCTGCTGTTGATCCTGTCGGGCATCGGCGCCTGGCGCATCCTGGACTCGCAGCGGGACAACCGCGAACTGGGCTACCGCCTGCAGACCAACGATCTGCTGCAGCAGCTGACCCGCCAGGTCGGCATCAACGCCAATCAGACCCAGGCCACCCTGGCGGCGGACCCGGACACGCTGCGCAAGCTGAAGGCCTCGATCCAGGCATCCGACGAACAGGCGCGGAAAATCAGCCGCCAGCTGGCCGACCTGCTGAACGGCCCGGAATCCGCCGCCCTGCTGCAACAGGCGGCGCAGGACCGGGCCGCCTACCTGCAAAGCCGCAACCAGGCCTTCAAGGACCTGGACGGCGGCAACTATGGCGAAGCCGACGCCTTCTTCAATCAGCAACTGCCGAAGATGACGGCGGGCTATCTGGCGCGGATCGACCAGTTGTCGCAACGCCAGAACGATTCCGTGCAGCAGCTGTTCGACCAGAGCGCCCGGTCCAGCGAACTGGGGCTGGCCGTCCTGGCCATCGCCACCTTGCTGGCCCTGATCCTGGCGCCGCTGTTCGCCTGGCGCGTCACCCGGTCCATCATCCGGCCGCTGCGCCATGCCGTCAGCCTCGCGGGCGCCGTGGCGCAACGCCGGCTGACCGTGCGCATCCGCGCCCAGGGCCGCGATGAAATCGGCGAACTGCTGACGGCGCTGGGCGCCATGGCCGACAATCTGCGCCAGGCCGTGGGAGAAGTGCGCGGCAGTTCCAACGCCATCGCGACAGCCTCCGCGCAGATCACGGAAGGCAACCTGGATCTATCGTCGCGCACCGAACAGCAGGCCGGCTCCCTGGCGCAGACCGCCGCCACCATGGAAGAAATCACCGCCACCGTGCGCCAGAGCGCCGACAACGCCCGACAGGCCAATGCCCTGGCCGAATCCGCCGCCCGGACCGCCTCCGACGGCGGCGCCATCGTGACCGAACTGGTGGGCACCATGGACGAGATCAACGGCAAATCCCAGCAGGTCGCCGATATCGTCGGCGTGATCGATTCCATCGCCTTCCAGACCAACATCTTGGCGCTGAACGCCGCCGTCGAGGCCGCCCGCGCCGGCGAACAGGGCCGCGGCTTCGCCGTGGTCGCCGCCGAAGTCCGGGCGCTGGCCCAGCGGTCGGCCGGCGCCGCCAAGGAAATCAAGGCCCTGATCGACACCTCCGTCGAAGCCACCGCCAAGGGCAACGAGCAGGCCGCCCGCGCCGGCGCCACCATGAAGAACATCGTCGACAGCATCAATCGCGTCACCGGCATCATGGGCGAAATCAACGCCGCCAGCCGCGAACAGACCACCGGCATCGAGGAAATCAATTCCGCCATGACGCAGATGGACGGCGTCACCCGCCAGAACGCCGGCCTGGTGGAAGCGTCCGCCGCAGCCGCCACCAGCCTGCGCAGGCAGGCCGACGCCCTGGCCGACCTGGTGGCGACCTTCACGCTGGACGATGAAAATGCCGCGCCCGAAGAAGCCCCCGCGGTCCGACCGGCTGCGGCGATCGGAGGGCATCCCGGAAAACTCTTGCTTGCGCAGCAATGA
PROTEIN sequence
Length: 541
MRNLKISTRLTLSFSFVVILLLILSGIGAWRILDSQRDNRELGYRLQTNDLLQQLTRQVGINANQTQATLAADPDTLRKLKASIQASDEQARKISRQLADLLNGPESAALLQQAAQDRAAYLQSRNQAFKDLDGGNYGEADAFFNQQLPKMTAGYLARIDQLSQRQNDSVQQLFDQSARSSELGLAVLAIATLLALILAPLFAWRVTRSIIRPLRHAVSLAGAVAQRRLTVRIRAQGRDEIGELLTALGAMADNLRQAVGEVRGSSNAIATASAQITEGNLDLSSRTEQQAGSLAQTAATMEEITATVRQSADNARQANALAESAARTASDGGAIVTELVGTMDEINGKSQQVADIVGVIDSIAFQTNILALNAAVEAARAGEQGRGFAVVAAEVRALAQRSAGAAKEIKALIDTSVEATAKGNEQAARAGATMKNIVDSINRVTGIMGEINAASREQTTGIEEINSAMTQMDGVTRQNAGLVEASAAAATSLRRQADALADLVATFTLDDENAAPEEAPAVRPAAAIGGHPGKLLLAQQ*