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scnpilot_solids1_trim150_scaffold_38_curated_16

Organism: solids_Castellaniella_1

near complete RP 52 / 55 BSCG 51 / 51 ASCG 13 / 38
Location: comp(17139..17510)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Pusillimonas noertemannii RepID=UPI0002F66E5B similarity UNIREF
DB: UNIREF100
  • Identity: 61.2
  • Coverage: 121.0
  • Bit_score: 159
  • Evalue 2.00e-36
Putative DNA-binding protein {ECO:0000313|EMBL:CDM24890.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella defragrans 65Phen.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 67.2
  • Coverage: 119.0
  • Bit_score: 170
  • Evalue 1.20e-39
hns-like transcription regulator protein; K03746 DNA-binding protein H-NS similarity KEGG
DB: KEGG
  • Identity: 54.8
  • Coverage: 124.0
  • Bit_score: 139
  • Evalue 6.80e-31

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Taxonomy

Castellaniella defragrans → Castellaniella → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 372
ATGGCCCGTACCAGTTACGCCTCGCAAAAAACTCGGCTGGAAAAAGAAAAAGCCAAAATCGAAAAACAGCTGCAGACCCTGCAAGCCAAACAACGCAAACCGGTGATCACGTCCATTGTGCGGTCCATGCGCGATTATGGCATTACCCCGGAAGAGATCGCCGCCGTCTTCGACCGTAAATCCGCCAGCCGCCCCGCCACTGCCGCGCCGCGCAAGGCCGCCTCCGGCGCCAAACGCGTCATTCCGCCGAAATACCGCCATCCCGAAACCAAGGCCGAATGGACGGGCCGCGGCAAGCCGCCGCGCTGGGTGTCCGACGCCGAAGCGTCCGGCGTTTCGCGCGACACCTTCCTGATCGAAAAGACCGCCTGA
PROTEIN sequence
Length: 124
MARTSYASQKTRLEKEKAKIEKQLQTLQAKQRKPVITSIVRSMRDYGITPEEIAAVFDRKSASRPATAAPRKAASGAKRVIPPKYRHPETKAEWTGRGKPPRWVSDAEASGVSRDTFLIEKTA*