ggKbase home page

scnpilot_solids1_trim150_scaffold_42698_curated_1

Organism: solids_Flavobacteriales_1

partial RP 13 / 55 BSCG 11 / 51 ASCG 2 / 38
Location: comp(2..499)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Flavobacterium sp. WG21 RepID=UPI00034AFCB3 similarity UNIREF
DB: UNIREF100
  • Identity: 55.0
  • Coverage: 169.0
  • Bit_score: 191
  • Evalue 6.40e-46
Transcriptional regulator {ECO:0000313|EMBL:KFF19705.1}; TaxID=1233950 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium sp. JM1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 58.0
  • Coverage: 169.0
  • Bit_score: 203
  • Evalue 3.00e-49
LytTR family two component transcriptional regulator; K02477 two-component system, LytT family, response regulator similarity KEGG
DB: KEGG
  • Identity: 57.6
  • Coverage: 170.0
  • Bit_score: 190
  • Evalue 4.50e-46

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Chryseobacterium sp. JM1 → Chryseobacterium → Flavobacteriales → Flavobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 498
ATGAGCAGGTTGAAAGTAATGATCGTTGATGATGAAAGACTGGCAAGGGAAGAAATAAAACAACACCTGCTCAGCTACAAGGATTTTGACATAGCAGGTGAGGCGGCAAACGCAGACGAAGCAGAAAAGCTGATCATCCAGTTTCAGCCCGACTTGATTTTCCTGGATATACAGATGCCGGAACGTTCGGGGCTCGAGTTGCTGGAATCATTGGAATATGTGCCGGAAGTTATATTCACAACAGCTTATGATCAGTATGCGGTAAAAGCTTTTGAGCTGAATGCATTGGATTACCTGGTTAAGCCTGTTCGCAGAGAACGTTTTTTCCAGGCAGTTGAAAAAGTCAGAACAAAGTTTCCGGTCAAATCTGGCCTGGCCGCAGAACATACCATTTTTATCAGGGAAGGGGAACGCTATTATTTTGTGAAAGTGAAAGATATTTACCTGATCGAATCAGCCGGGAATTATGCCAGGTTATATGTGAATGGGAAAAAGCTA
PROTEIN sequence
Length: 166
MSRLKVMIVDDERLAREEIKQHLLSYKDFDIAGEAANADEAEKLIIQFQPDLIFLDIQMPERSGLELLESLEYVPEVIFTTAYDQYAVKAFELNALDYLVKPVRRERFFQAVEKVRTKFPVKSGLAAEHTIFIREGERYYFVKVKDIYLIESAGNYARLYVNGKKL