ggKbase home page

scnpilot_solids1_trim150_scaffold_11725_curated_1

Organism: solids_Flavobacteriales_1

partial RP 13 / 55 BSCG 11 / 51 ASCG 2 / 38
Location: 3..563

Top 3 Functional Annotations

Value Algorithm Source
Uncharacterized protein n=1 Tax=Rhodonellum psychrophilum GCM71 = DSM 17998 RepID=U5BVB1_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 66.7
  • Coverage: 186.0
  • Bit_score: 250
  • Evalue 1.00e-63
RND family efflux transporter MFP subunit similarity KEGG
DB: KEGG
  • Identity: 66.5
  • Coverage: 185.0
  • Bit_score: 248
  • Evalue 1.20e-63
Tax=CG_Flavo_02 similarity UNIPROT
DB: UniProtKB
  • Identity: 67.0
  • Coverage: 185.0
  • Bit_score: 250
  • Evalue 1.40e-63

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

CG_Flavo_02 → Flavobacteriales → Flavobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 561
ATTAAAGCACCTTTTAACGGTATTGTAACTGCCAAACTTAATGAAGAAGGCGGTTTTGCAGCACCGGGAGTTCCTTTGTTGCAAATAACAGACATAAGCACTTTACGCTTTACAGTCAATGTTCCCGAAAATGATTTGGTAAAATTCCAAAACAACCAAACTTACAAAATCAATGCAGATGTTTATCCCGACATTTCACTTTCGGGCAAAGTATCAATGATAGGAAGCAAAGCCAATATGGGAAATAGTTTTCCAATACAGTTTCAAGTTGCAAACACCAAAAACCTAAATATCAAATCGGGAATGTTTGGTAAAGTAAGTCTTTCTGAAACCAAACAAGAGCAAGGTATTCTTATTCCCACATCTGCCATTATTGAAGAAAATGGAATTGCAAAAGTGTATCTCATAAAAAACGGAAAAGCTGTATTACAAACGATTACAACTTCTAAAACTATTGGGAATAAAACGCTTGTTTCAAGTGGCTTAAATGAAAATGATATCATCGTTACGAATGGATTTATCAATCTTTTTGACGGAGCAAATGTTTCAATTAAAAATTAA
PROTEIN sequence
Length: 187
IKAPFNGIVTAKLNEEGGFAAPGVPLLQITDISTLRFTVNVPENDLVKFQNNQTYKINADVYPDISLSGKVSMIGSKANMGNSFPIQFQVANTKNLNIKSGMFGKVSLSETKQEQGILIPTSAIIEENGIAKVYLIKNGKAVLQTITTSKTIGNKTLVSSGLNENDIIVTNGFINLFDGANVSIKN*