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scnpilot_solids1_trim150_scaffold_19962_curated_3

Organism: solids_Flavobacteriales_1

partial RP 13 / 55 BSCG 11 / 51 ASCG 2 / 38
Location: comp(1358..1759)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma-70 factor, expansion family 1 n=1 Tax=Flavobacterium sp. CF136 RepID=J3BZC4_9FLAO similarity UNIREF
DB: UNIREF100
  • Identity: 43.4
  • Coverage: 113.0
  • Bit_score: 97
  • Evalue 1.30e-17
Uncharacterized protein {ECO:0000313|EMBL:KFF04110.1}; TaxID=362418 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium reichenbachii.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 41.0
  • Coverage: 117.0
  • Bit_score: 99
  • Evalue 3.80e-18
ECF subfamily RNA polymerase sigma-24 subunit; K03088 RNA polymerase sigma-70 factor, ECF subfamily similarity KEGG
DB: KEGG
  • Identity: 38.8
  • Coverage: 139.0
  • Bit_score: 86
  • Evalue 9.70e-15

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Taxonomy

Flavobacterium reichenbachii → Flavobacterium → Flavobacteriales → Flavobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 402
CGGGAAAAGATGGCTGAAGTGAATAATTTCCGGAGCTACCTTTTTATCTTAACCCGCAATCTTATCTTCGACCGGATGAAATCGAAAGCGTATGAAACTACCGCCGATACAGAGCTTTATCCGGCCCGTATGACCATAAGCGATGCAGATTACCGGCTGAGGAGCAGGCAGTGCCTGGACCTGCTGCTGGAAGCGATAAGCCTGCTTCCCCCCCGTCAAAAAGAAGTCTTTCAAATGGCCAAGATAAACGGGCTGAGCCATGAACGCATTGCCCGGAAGCTTCATCTTTCTCCGCTCACCGTAAAGAAGCATATGGCTGAGGCCCTTAAGTTTGTTCGCCGCCACCTGGAAGGGCTGTCGGCCGCTGTAGTCTGTCTGCTGGATATGATGTCACGCTCTTAA
PROTEIN sequence
Length: 134
REKMAEVNNFRSYLFILTRNLIFDRMKSKAYETTADTELYPARMTISDADYRLRSRQCLDLLLEAISLLPPRQKEVFQMAKINGLSHERIARKLHLSPLTVKKHMAEALKFVRRHLEGLSAAVVCLLDMMSRS*