ggKbase home page

scnpilot_solids1_trim150_scaffold_9850_curated_3

Organism: solids_Flavobacteriales_1

partial RP 13 / 55 BSCG 11 / 51 ASCG 2 / 38
Location: 2409..2918

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma-70 factor, expansion family 1 n=1 Tax=Flavobacterium sp. CF136 RepID=J3BZC4_9FLAO similarity UNIREF
DB: UNIREF100
  • Identity: 33.7
  • Coverage: 175.0
  • Bit_score: 103
  • Evalue 2.40e-19
RNA polymerase sigma-70 factor, expansion family 1 {ECO:0000313|EMBL:EJL61176.1}; TaxID=1144313 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. CF136.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 33.7
  • Coverage: 175.0
  • Bit_score: 103
  • Evalue 3.30e-19
RNA polymerase, sigma-24 subunit, ecf subfamily similarity KEGG
DB: KEGG
  • Identity: 34.9
  • Coverage: 169.0
  • Bit_score: 102
  • Evalue 9.70e-20

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Flavobacterium sp. CF136 → Flavobacterium → Flavobacteriales → Flavobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 510
ATGCAGGAAAATTTGGAAAGCAGACATATATATAATGAAAAGGAGTTAGCCATCCGGATCGCCAACGGTGATAACGAAGCGTTTGATCGACTGTTTTATTATTACTGGGATCATGTGTATTCCGTGGCGCTTGTCATGAGCAAATCGCCTGCCATGGCAGAGGACATCGCGCAGGAAGTTTTCCTTTCCCTGCTGGAAAACCGCGCCGCCCTCGCCGGCGTGGAAAATTTAAAGGGCTATTTATATAATCACATAAAATTCAATCTTCACAAACGGCTTCGCCGGCTGCGGGTAGAAGACGCTTATCAACACTACCTGCTATCGAAACTACAGGGGGTGAACTCCCCTGCGCCGGATGACAGCCTCGCTGCTAAGGAATTAATGAAAGCAATAAGCGGCGGACTGGAACTGCTGCCGCCCCAGCAAAAACGGGCATTCCAGCTGAGCCGCTGGAAGGGATTGAGTCACGATGAAATTGGCTGGGAAATGGGTATCAGCAGCCGGACCGTA
PROTEIN sequence
Length: 170
MQENLESRHIYNEKELAIRIANGDNEAFDRLFYYYWDHVYSVALVMSKSPAMAEDIAQEVFLSLLENRAALAGVENLKGYLYNHIKFNLHKRLRRLRVEDAYQHYLLSKLQGVNSPAPDDSLAAKELMKAISGGLELLPPQQKRAFQLSRWKGLSHDEIGWEMGISSRTV