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scnpilot_solids1_trim150_scaffold_5648_curated_5

Organism: solids_Flavobacteriales_1

partial RP 13 / 55 BSCG 11 / 51 ASCG 2 / 38
Location: comp(3950..4405)

Top 3 Functional Annotations

Value Algorithm Source
Response regulator with CheY-like receiver domain and winged-helix DNA-binding domain n=1 Tax=Flexibacter litoralis (strain ATCC 23117 / DSM 6794 / NBRC 15988 / NCIMB 1366 / Sio-4) RepID=I4AK45_FLELS similarity UNIREF
DB: UNIREF100
  • Identity: 82.8
  • Coverage: 151.0
  • Bit_score: 249
  • Evalue 2.40e-63
Winged helix family two component transcriptional regulator {ECO:0000313|EMBL:GAL83650.1}; TaxID=153721 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Sporocytophaga.;" source="Sporocytophaga myxococcoides.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 85.4
  • Coverage: 151.0
  • Bit_score: 260
  • Evalue 1.10e-66
response regulator with CheY-like receiver domain and winged-helix DNA-binding domain similarity KEGG
DB: KEGG
  • Identity: 82.8
  • Coverage: 151.0
  • Bit_score: 249
  • Evalue 7.50e-64

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Taxonomy

Sporocytophaga myxococcoides → Sporocytophaga → Cytophagales → Cytophagia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 456
GTAATCATTATTTCTGCAAAAAATTCGCTTGATGATAAACTAAAAGGGTTAGAACTTGGTGCCGATGATTACCTTACTAAACCATTTCACATTGCAGAGCTGAATGCAAGAGTAAAAGCTGTTTTACGCAGAAAAGATTTGGGCGGAAAAACAACTATTGAGATTGCNNNNNNNGCTTTAGATTTAAAGGAAAGACAACTCACCATTAACAAAGAAAACATTCCGTTAAACAGAAAAGAGTTTGATATTCTAAATTATTTTTTGCTGAATAAAAATCGTTTAGTAACAAAAACTGCTTTGGCAGAACACGTTTGGGGCGATAATATTGACCAAGCCGATAACTTTGATTTTATTTATTACCAAATAAAAAACCTGCGCAAAAAATTGCAAACAGCACAAGCCGATATTGAAATTGAGGCAGTTTATGGTTTTGGATATAAACTAATAGAGAAGTGA
PROTEIN sequence
Length: 152
VIIISAKNSLDDKLKGLELGADDYLTKPFHIAELNARVKAVLRRKDLGGKTTIEIXXXALDLKERQLTINKENIPLNRKEFDILNYFLLNKNRLVTKTALAEHVWGDNIDQADNFDFIYYQIKNLRKKLQTAQADIEIEAVYGFGYKLIEK*