ggKbase home page

scnpilot_solids1_trim150_scaffold_17463_curated_2

Organism: solids_Gemmatimonadetes_1

near complete RP 47 / 55 BSCG 47 / 51 MC: 2 ASCG 13 / 38
Location: comp(135..584)

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L13 n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=RL13_GEMAT similarity UNIREF
DB: UNIREF100
  • Identity: 75.2
  • Coverage: 149.0
  • Bit_score: 246
  • Evalue 2.00e-62
rplM; 50S ribosomal protein L13; K02871 large subunit ribosomal protein L13 similarity KEGG
DB: KEGG
  • Identity: 75.2
  • Coverage: 149.0
  • Bit_score: 246
  • Evalue 6.30e-63
50S ribosomal protein L13 {ECO:0000255|HAMAP-Rule:MF_01366}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC; 100505).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 75.2
  • Coverage: 149.0
  • Bit_score: 246
  • Evalue 2.80e-62

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Gemmatimonas aurantiaca → Gemmatimonas → Gemmatimonadales → Gemmatimonadetes → Gemmatimonadetes → Bacteria

Sequences

DNA sequence
Length: 450
ATGAAAACCTACAGCGCGACTCCCGCGGACATCGAGCACAAGTGGTACGTGGTCGATGCCGAGGGCATGGTCCTCGGTCGACTCGCAACGCAGATCGCAATGGTCCTGCGCGGCAAGCACAAGCCGATGTTCACGCCCCACATGGACACCGGTGACCACGTCATCGTCATCAATGCGTCCAAGGTGAAGGTCACCGGCCGCAAGGCCGAGCAGAAGCAGTACTTCCGTCACACGGGCTACATGGGACACGAGCGGTTCACGCCCTACGCCACGATGATGGCCAAGCACCCCGAGAGGATCATCGAGAAGGCCGTCTTCGGCATGCTTCCCAAGACGGCTCTCGCCCGTACGACTCTGCGCCGGAAGCTCCGCGTCTACGCTGGCAGCGAGCATCCGCACACCGCGCAGCAGCCCCAGGTCATGACCTTCCCGAAGAGCGAGGCCAGGTAA
PROTEIN sequence
Length: 150
MKTYSATPADIEHKWYVVDAEGMVLGRLATQIAMVLRGKHKPMFTPHMDTGDHVIVINASKVKVTGRKAEQKQYFRHTGYMGHERFTPYATMMAKHPERIIEKAVFGMLPKTALARTTLRRKLRVYAGSEHPHTAQQPQVMTFPKSEAR*