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scnpilot_solids1_trim150_scaffold_38831_curated_2

Organism: solids_Gemmatimonadetes_1

near complete RP 47 / 55 BSCG 47 / 51 MC: 2 ASCG 13 / 38
Location: comp(117..974)

Top 3 Functional Annotations

Value Algorithm Source
tRNA pseudouridine synthase B {ECO:0000256|HAMAP-Rule:MF_01080}; EC=5.4.99.25 {ECO:0000256|HAMAP-Rule:MF_01080};; tRNA pseudouridine(55) synthase {ECO:0000256|HAMAP-Rule:MF_01080}; tRNA pseudouridylate synthase {ECO:0000256|HAMAP-Rule:MF_01080}; tRNA-uridine isomerase {ECO:0000256|HAMAP-Rule:MF_01080}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 50.7
  • Coverage: 282.0
  • Bit_score: 264
  • Evalue 1.90e-67
truB; tRNA pseudouridine synthase B (EC:5.4.99.-); K03177 tRNA pseudouridine55 synthase [EC:5.4.99.25] similarity KEGG
DB: KEGG
  • Identity: 49.5
  • Coverage: 289.0
  • Bit_score: 248
  • Evalue 3.10e-63
tRNA pseudouridine synthase B n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8P0_GEMAT similarity UNIREF
DB: UNIREF100
  • Identity: 49.5
  • Coverage: 289.0
  • Bit_score: 248
  • Evalue 1.00e-62

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Taxonomy

Gemmatimonadetes bacterium KBS708 → Gemmatimonadetes → Gemmatimonadetes → Bacteria

Sequences

DNA sequence
Length: 858
GTGGACAAGCCCGCCGGGATCACCTCACATGATGCTGTCGCCCGTGCGAGACGTGCGCTGGGCGAGCGCCGAATCGGCCACCACGGTACGCTCGATCCGTTCGCCACTGGCCTGCTCGTGCTACTGGTAGGTCGGGCGACCCGGCTCGCTCCATTCCTGTCGGGCGAGCCAAAGGTTTACGAGGCGGAATTCAGCTTTGGTGTGGAGACGTCCACGGACGACCTCACCGGCGAGATCGTGCGCCAGGCGCCGCTCCCGTCGCCGGAGGCGGTGCGCGAGGCGATCGTCACCCTCACCGGAACCTTCGAGCAGTTGCCTCCGGCCGTGTCGGCCAAGCAGGTGCGTGGTGAGAGGGCGCACGCCGCTGCGCGCGCAGGGCGACCCCTCGAGCTCCGGCCGGTGACGATCACCGTCCATGAGTGGACGGTTCACGAGCTGACGCCGCATCGACTGGTAGCCACGATCCGGTGCGCAGGAGGCACGTATATTCGTGCCCTCGCTCGCGACCTAGGTCGGGCCACAGGAGGTGCTGCACATCTCGTGGCACTCCGCCGGCTTGCCAGTGGTGTCTTCAGGGTCGAGGACGCGATCGGTGTCGATGAACTCCAGCCGGGCGTGAAGGTGCCCTTGCGTTCGCCACTGGATGGCGTGCCCGAGCTGCCGCGAGAAGTACTGGACGGGGAAGNNNNNNNNNNNNNNNNNNNNNNCGGTACAATCGCGGCGACGGTCTCCGGTGATGTCGGTGCACTGATCGACGACCGGGGAGGCCTGGTCGCGATCGGCGAACGGGTGCGCGAACAGTGGCAGCCGCGAGTGGTCCTGCAGGATCCTGGTGAGCGGGTGGCTCGAGATGGTTGA
PROTEIN sequence
Length: 286
VDKPAGITSHDAVARARRALGERRIGHHGTLDPFATGLLVLLVGRATRLAPFLSGEPKVYEAEFSFGVETSTDDLTGEIVRQAPLPSPEAVREAIVTLTGTFEQLPPAVSAKQVRGERAHAAARAGRPLELRPVTITVHEWTVHELTPHRLVATIRCAGGTYIRALARDLGRATGGAAHLVALRRLASGVFRVEDAIGVDELQPGVKVPLRSPLDGVPELPREVLDGEXXXXXXXXGTIAATVSGDVGALIDDRGGLVAIGERVREQWQPRVVLQDPGERVARDG*