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scnpilot_solids1_trim150_scaffold_2298_curated_9

Organism: solids_Gemmatimonadetes_1

near complete RP 47 / 55 BSCG 47 / 51 MC: 2 ASCG 13 / 38
Location: comp(9185..10228)

Top 3 Functional Annotations

Value Algorithm Source
Pseudouridine synthase {ECO:0000256|RuleBase:RU362028}; EC=5.4.99.- {ECO:0000256|RuleBase:RU362028};; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 69.8
  • Coverage: 331.0
  • Bit_score: 469
  • Evalue 3.60e-129
rluD; ribosomal large subunit pseudouridine synthase D (EC:5.4.99.-); K06180 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] similarity KEGG
DB: KEGG
  • Identity: 70.8
  • Coverage: 308.0
  • Bit_score: 443
  • Evalue 4.70e-122
Pseudouridine synthase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A885_GEMAT similarity UNIREF
DB: UNIREF100
  • Identity: 70.8
  • Coverage: 308.0
  • Bit_score: 443
  • Evalue 1.50e-121

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Taxonomy

Gemmatimonadetes bacterium KBS708 → Gemmatimonadetes → Gemmatimonadetes → Bacteria

Sequences

DNA sequence
Length: 1044
ATGACGGGCTCCGGACCGCCGACGGCCGGACCGGGACGTCACAGGCTGGAGATCGCGACCGACCAGCAGATTCGCCTGGATCTGCTGATAGCAGAGCGCCTGGGACTCTCCCGCACCCAGGCGGCGACGTTGATCGCCACCGACAAGGTGCGCGTGGACGGCCGGCGGGAACGAGCCAGCTACCGTCCACACCGGGGCGAGGCGGTGACGGTGGAGATCGAGCCGCCAGCGCATCGCGACATCATCGGCGAGGAGATCCCGCTCTCCATCGTCTACGAGGACGAGCACCTGCTGGTGGTCGACAAGCCGGCGGGAATGGTGGTGCATCCTGCCCCCGGGAACTGGACTGGCACGCTCGTGAACGCCCTGATCGGGCGCGGCGGTTCCCTGAGCGACGAGGGAGGGGAGGAGCGACAGGGGATCGTCCATCGGTTGGACAAGGAAACCTCGGGGTTGCTCCTGGTAGCACGGACCGGCCGCGCACATCGGCTGCTCTCATCGGCGATTGCCGCGCGGCGGGTATCCAGGCGTTACGCCGCCGTCTCGTGGGGCCACCTGAAGGAAGATCGCCTGACGGTGGACCGGCCGATTGCCCGGGATCCGCGAGACCGGAAGCGCATGGCGATCGTCCAGGGAGGACGGGCCGCACGCACGGACTTCGTGCGACTGGCGAGGTTCGACTCGGTGGACCTGCTGCGGGCGGAACTGCACACGGGTCGGACACACCAGATCCGTGTGCACCTGGCTTCGGTGGGGCATCCGGTGGTCGGTGACGATACTTATGGCGGTGGCGGCGGCCGACGCCTGCTGGCGCTGCCGCCTCACCGACATTTTCTGCACGCCGCGTGGCTCGGTCTACGGCACCCGATAACGGGCGAAGCGCTGGACTTCAGGGCTCCCCTGCCGCCGGAGCTGGCATCGTCGCTGGCCATCGCCGCCGGAGATCCCTCACTTGCTGCCCACCCTGACCCGCTCGATTTCTTTGGATTCTTCGACGAACACGGCATCGGGCTCGCCCGATCTGACACCGCCAGCGGAGACTGA
PROTEIN sequence
Length: 348
MTGSGPPTAGPGRHRLEIATDQQIRLDLLIAERLGLSRTQAATLIATDKVRVDGRRERASYRPHRGEAVTVEIEPPAHRDIIGEEIPLSIVYEDEHLLVVDKPAGMVVHPAPGNWTGTLVNALIGRGGSLSDEGGEERQGIVHRLDKETSGLLLVARTGRAHRLLSSAIAARRVSRRYAAVSWGHLKEDRLTVDRPIARDPRDRKRMAIVQGGRAARTDFVRLARFDSVDLLRAELHTGRTHQIRVHLASVGHPVVGDDTYGGGGGRRLLALPPHRHFLHAAWLGLRHPITGEALDFRAPLPPELASSLAIAAGDPSLAAHPDPLDFFGFFDEHGIGLARSDTASGD*