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scnpilot_solids1_trim150_scaffold_24978_curated_2

Organism: solids_Thiobacillus_2

partial RP 40 / 55 MC: 1 BSCG 39 / 51 MC: 2 ASCG 4 / 38
Location: 330..842

Top 3 Functional Annotations

Value Algorithm Source
putative lipoprotein B transmembrane; K03643 LPS-assembly lipoprotein id=12493209 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 171.0
  • Bit_score: 328
  • Evalue 3.50e-87
putative lipoprotein B transmembrane; K03643 LPS-assembly lipoprotein similarity KEGG
DB: KEGG
  • Identity: 66.9
  • Coverage: 163.0
  • Bit_score: 208
  • Evalue 1.60e-51
Tax=GWE1_Thiobacillus_62_9_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 67.1
  • Coverage: 161.0
  • Bit_score: 214
  • Evalue 1.00e-52

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Taxonomy

GWE1_Thiobacillus_62_9_curated → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 513
ATGAATCGACGACTTTTCCTTGTGGCGCTGCCGGGGCTCCTCGCTGCGGGATGCGGTTTCCAGTTGCGCCGGTCCGCTGACATCCCGTTTGCCAGCCTGTATGTCGACGCGCCGGCTGGCAGCCTCGTGGCGCAGCGTATCCGGAAAAATCTGGCCACGAACCGGAAAACCCACCTCGCCGCGAATGCGGGCGAAGCCGAGGCGGTGCTCAAAATTACCCGGGAAGAGCGTACCCGTGACATCCTCTCGCTATCCGGTGCTGGAACCGTGACCGAATACCGGCTTGGACTGCGCCTGGGCTATACGCTGAACGACAAGGCCGGACGTCGTCTGGCAGCCTCCGAGAGTATCGAGCTTACGCGCGACATCACCTACGACGTCACGAAGGTGCTGGCCAAGGGCGCGGAGGAACAACTGCTGTATCGCGATATGGAAGATAACGCCGCCCAGCGCATCATGCGGCGCCTGCAGGCCATCAAGCCCGACGCGGTCGTTGATGAACATCCCGGCTGA
PROTEIN sequence
Length: 171
MNRRLFLVALPGLLAAGCGFQLRRSADIPFASLYVDAPAGSLVAQRIRKNLATNRKTHLAANAGEAEAVLKITREERTRDILSLSGAGTVTEYRLGLRLGYTLNDKAGRRLAASESIELTRDITYDVTKVLAKGAEEQLLYRDMEDNAAQRIMRRLQAIKPDAVVDEHPG*