ggKbase home page

scnpilot_solids1_trim150_scaffold_7432_curated_3

Organism: solids_Thiobacillus_2

partial RP 40 / 55 MC: 1 BSCG 39 / 51 MC: 2 ASCG 4 / 38
Location: comp(1446..2321)

Top 3 Functional Annotations

Value Algorithm Source
fdhB; formate dehydrogenase beta subunit (EC:1.2.1.2); K00124 formate dehydrogenase, beta subunit id=12493144 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 292.0
  • Bit_score: 614
  • Evalue 4.10e-173
fdhB; formate dehydrogenase beta subunit (EC:1.2.1.2); K00124 formate dehydrogenase, beta subunit similarity KEGG
DB: KEGG
  • Identity: 75.2
  • Coverage: 290.0
  • Bit_score: 476
  • Evalue 5.50e-132
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 90.4
  • Coverage: 292.0
  • Bit_score: 566
  • Evalue 1.80e-158

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RIFOXYA1_FULL_Hydrogenophilales_63_33_curated → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 876
ATGGCACTGCAATCCCTCGACATCAAGGCCCGGTCCGCCACGACGACCCCACCGCCCGACGTGCGCGCCAGAGGCGCGGTTCCTGTCGCCAAACTGATCGACATTTCCAAGTGCATCGGCTGCAAGGCCTGCCAGGTGGCATGCATGGAATGGAACGACCTGCGCGACGAGGTCGGCACCAACGCCGGCACCTACGACAACCCGCGTGATCTGACGGCCCAGTCGTGGACGGTGATGCGCTTCTCCGAAGTGGAAGTGGAGCAGGATCGGCTGGAATGGCTCATCCGCAAGGACGGCTGCATGCATTGCGCCGATCCGGGCTGTCTGAAAGCCTGCCCGGCGCCGGGAGCGATCGTTCAGTACGCGAACGGCATTGTGGATTTTCACGAGGAGCACTGCATCGGCTGCGGGTATTGCATCACTGGCTGCCCCTTCAATATCCCGCGTATTTCGAGCCGGGACAGCAAGGCGTACAAGTGCACCTTGTGTTCCGACCGCGTAGCCATCGGCCTGGAGCCCGCCTGCATCAAGACCTGTCCGACTGGCGCCCTGGTGTTCGGAACCAAGGACGACATGATTCTTCACGCCGAAGGGCGTATCGCCGATCTCAAGGAGCGCGGCTACAGCCATGCGGCGTTATACGATCCCAAGGGAGTCGGCGGTACGCACGTGATGTATGTGCTGCAGCATGGCGACAAGCCCGAGTTGTACGCGAATCTGCCCAGGGATCCGAGTATCAGTCCGTTGGTCAGCCTATGGAAGGGCGTGACCAAGCCGCTCATGAGTTTTGGCCTGGGCCTGGCTGTCTTTGCCGGTTTCTTCCATTACGTGACGGCAGGTCCCAAGGAGGTGGAGGAAGAAGAAAAGACGGATTGA
PROTEIN sequence
Length: 292
MALQSLDIKARSATTTPPPDVRARGAVPVAKLIDISKCIGCKACQVACMEWNDLRDEVGTNAGTYDNPRDLTAQSWTVMRFSEVEVEQDRLEWLIRKDGCMHCADPGCLKACPAPGAIVQYANGIVDFHEEHCIGCGYCITGCPFNIPRISSRDSKAYKCTLCSDRVAIGLEPACIKTCPTGALVFGTKDDMILHAEGRIADLKERGYSHAALYDPKGVGGTHVMYVLQHGDKPELYANLPRDPSISPLVSLWKGVTKPLMSFGLGLAVFAGFFHYVTAGPKEVEEEEKTD*