ggKbase home page

scnpilot_solids1_trim150_scaffold_43536_curated_2

Organism: solids_Thiobacillus_2

partial RP 40 / 55 MC: 1 BSCG 39 / 51 MC: 2 ASCG 4 / 38
Location: comp(580..1032)

Top 3 Functional Annotations

Value Algorithm Source
cytochrome c-type biogenesis protein CcmE; K02197 cytochrome c-type biogenesis protein CcmE id=12494452 bin=THIO_HI species=Nitrosospira multiformis genus=Nitrosospira taxon_order=Nitrosomonadales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 98.7
  • Coverage: 151.0
  • Bit_score: 287
  • Evalue 1.00e-74
cytochrome c-type biogenesis protein CcmE; K02197 cytochrome c-type biogenesis protein CcmE similarity KEGG
DB: KEGG
  • Identity: 73.0
  • Coverage: 148.0
  • Bit_score: 224
  • Evalue 2.60e-56
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_26_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 75.8
  • Coverage: 149.0
  • Bit_score: 225
  • Evalue 5.10e-56

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

R_Betaproteobacteria_67_26 → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 453
ATGGCAATGAAACCACGTCACAGAAAACTCGCCCTGATCGTCCTGGTCGTCGCCGCGCTTGGGGTTGCGCTGGCGCTGGTGCTCAATGCCTTCAACAGCAATCTGGTGTTCTTTTTCTCGCCGACCCAGGTCGCCAATGGCGAGGCGCCGACCGGCCGGGCTTTCCGCATCGGCGGCCTGGTCGAGGCGGGGAGCGTCCGGCGCGAGGCGGATGGGCTCACCACGCGTTTCGTCGTCACCGATACCGCCCGCTCGATCCCGGTGGCCTACACCGGCATCCTGCCCGACCTGTTCAAGGAGGGCAAAGGCGTGGTGGCCGAAGGCAGGCTGGGAACCGACGGGCTGTTCGACGCCACCCAGGTGCTGGCCAAGCACGACGAGAACTACATGCCGCCGGAAGCCGCCAGCGCAATCGAACAGGCGCAGAAGGCGCAACAGACGATCGCGGAGTGA
PROTEIN sequence
Length: 151
MAMKPRHRKLALIVLVVAALGVALALVLNAFNSNLVFFFSPTQVANGEAPTGRAFRIGGLVEAGSVRREADGLTTRFVVTDTARSIPVAYTGILPDLFKEGKGVVAEGRLGTDGLFDATQVLAKHDENYMPPEAASAIEQAQKAQQTIAE*