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scnpilot_solids1_trim150_scaffold_6932_curated_4

Organism: solids_Thiobacillus_2

partial RP 40 / 55 MC: 1 BSCG 39 / 51 MC: 2 ASCG 4 / 38
Location: comp(2428..2976)

Top 3 Functional Annotations

Value Algorithm Source
sigma-24 (FecI); K03088 RNA polymerase sigma-70 factor, ECF subfamily id=12493479 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 183.0
  • Bit_score: 362
  • Evalue 2.30e-97
sigma-24 (FecI); K03088 RNA polymerase sigma-70 factor, ECF subfamily similarity KEGG
DB: KEGG
  • Identity: 73.1
  • Coverage: 182.0
  • Bit_score: 275
  • Evalue 1.50e-71
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 89.1
  • Coverage: 183.0
  • Bit_score: 330
  • Evalue 1.40e-87

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Taxonomy

RIFOXYA1_FULL_Hydrogenophilales_63_33_curated → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 549
ATGCTCAGCCGTCTTCTTTTTGGCCCGTCTCGCCCCGGTATCGAAGCCTTGCGCCCGCTGCTCTACCGGATCGCCTTTGCCTGGTGCCATGATGCCGCGCTGGCGGACGATCTGGTGCAGGAAGCGCTCTCCAAGGGGTGGAAGCGGCGCGCCCAACTGCGCGACGAGGCCGCGCTGAAGGCATGGATGGTATCGATCATGAACCACTGCTGGCTCGATCACTTGCGCAGCCGGCGCGACTTCGACGACATCGAGGACTGGCAGGACGAACTTGAGTCTGCCGCCGATGCCCCAGAGGTGCGCTGCGATCGCGAGCGGGTGATCGCCTGCGTGCGCGAGGCCGTGGCGCGCCTGCCGTTGGGCCAGCGCCAGGTGCTGACGCTGGTCGACCTGGAGGAATTCAGTTATGCCGACGTGGCCGCGATTCTGGATATCCCGGTCGGTACCGTGATGAGCCGCCTGTCGCGTGCGCGCGCATCCCTGAAAAGTCTGCTGAACCCCGCGCTGCAACAGTCGGCGGTGCAGCCGCTGCTGAGGAGGGTCAAATGA
PROTEIN sequence
Length: 183
MLSRLLFGPSRPGIEALRPLLYRIAFAWCHDAALADDLVQEALSKGWKRRAQLRDEAALKAWMVSIMNHCWLDHLRSRRDFDDIEDWQDELESAADAPEVRCDRERVIACVREAVARLPLGQRQVLTLVDLEEFSYADVAAILDIPVGTVMSRLSRARASLKSLLNPALQQSAVQPLLRRVK*