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scnpilot_solids1_trim150_scaffold_9048_curated_3

Organism: solids_Thiobacillus_2

partial RP 40 / 55 MC: 1 BSCG 39 / 51 MC: 2 ASCG 4 / 38
Location: 1311..2729

Top 3 Functional Annotations

Value Algorithm Source
type I secretion outer membrane protein TolC; K12340 outer membrane channel protein id=12494254 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 473.0
  • Bit_score: 902
  • Evalue 2.10e-259
type I secretion outer membrane protein TolC; K12340 outer membrane channel protein similarity KEGG
DB: KEGG
  • Identity: 71.7
  • Coverage: 431.0
  • Bit_score: 588
  • Evalue 2.10e-165
Tax=GWE1_Thiobacillus_62_9_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 76.3
  • Coverage: 435.0
  • Bit_score: 641
  • Evalue 7.20e-181

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Taxonomy

GWE1_Thiobacillus_62_9_curated → Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1419
ATGCTTTTCAAGCCCCCGTCTCTTTTGCTCGTTCTCGCGCTGGTGCCCATGGCCCATGCAGAAAACCTGTCCGCCGTCTTCCAGGACGCGCAGGCCTACGATGCGCAGTATGCCGCCGCCCGCGCCGCCTGGCAGGCCGGCCAGGAAAAGGCCGTGCAGGGCCGTGCGGGGCTGCTCCCCAATGTCAACCTCGGCGGCAACGTCCAGCACAACAAGCTTGACTCCACCCTGCCCGGCGGCGACGCCGACTACACCTCCAATGGCCTGTCGCTGAATGCCACGCAACCGCTGTTCCGCAAACAGAACTGGATACAGTACGAGCAGTCGCGGGAACAGGTGAAACTTGCCGGGATGCAGTTGAAGGTGGCCGAGCAGGAACTGATCCTGCGCGTCGCGCAGGCCTATTTCGACGTGCTGCAGTCGCAGGACAATATCGCCTTCATCCAGGCGCAGAAATCGGCCATCACCGAACAGCTGGCATCCGCCCGGCGCAATTTCGAAGTCGGGACCGCCACCATCACCGACACCCATGAAGCGCAGGCGCGCTACGACCTTGCCGTGGCACAGGAAATCGCCGAGCAGAACAGCCTCGCGATCCGTCTGCGCGCGCTGGAAAAAATGATCGGCAAGCCCCCCGGCGTCTTGGACATCTTCATCGAACGGGGCCCGCTCAAGGTCGACGCCGAGTCTATCGATACCTGGGCCGCACGTGCCGCCGCGGACAACCTGCAGGCTGGAATCCGCCGGATCGCCAAGACCCTGGCCGACCAGGAAGTCGAGCTCAACCGCGCCGGCCACTATCCCACGCTCGACGCGGTCGCCGGCTATACCGTCAGCAACAACCAGAATTTCGGTGCGATACAGATGGATACCCGTACTGCCAGCATCGGTGTTCAGCTCAACCTGCCGATCTACCAGGGCGGCCTCGTCAACTCGCGTGTGCGCGAAGCGGTGGCCAACCAGGAAAAAGCGCGCCACGACCTCGAGACCGCGACGCGCGACGCCAGCCTGCAGGCCCGTCAGGCCTGGCTCGACGTCAGCAGCGGCGCCGCCCGCGTGCAGGCCCTGGAGCAGGCACTCGCTTCCACCCGGACCCAGCTCGACTCCACCAGGCTTGGCCTGCAGGTCGGCGTGCGCACCAGCCTCGACGTCCTGAACGCCGAACAGCAGGTGCTGTCGGCCAGTCGCGATCTGGCCGGCGCGCGTTACGCCTACCTGCTGGCCGGGTTGTCGCTCAAGGCTGCTGCGGGCAGCCTCTCGGCAGACGATCTGCGGGCGATCGACGCCTTGTTGAGCCGGCAGCCCGACAGTCCCCCGCTATCCGCTGTCGATCCCCCGGCGACGGCCGCCCCTGCGGCACGGCTCCTGAAACAAGGCTCGCTGACACGTGGCCAGGCAGACCAGACCGCCGCCTGCTAA
PROTEIN sequence
Length: 473
MLFKPPSLLLVLALVPMAHAENLSAVFQDAQAYDAQYAAARAAWQAGQEKAVQGRAGLLPNVNLGGNVQHNKLDSTLPGGDADYTSNGLSLNATQPLFRKQNWIQYEQSREQVKLAGMQLKVAEQELILRVAQAYFDVLQSQDNIAFIQAQKSAITEQLASARRNFEVGTATITDTHEAQARYDLAVAQEIAEQNSLAIRLRALEKMIGKPPGVLDIFIERGPLKVDAESIDTWAARAAADNLQAGIRRIAKTLADQEVELNRAGHYPTLDAVAGYTVSNNQNFGAIQMDTRTASIGVQLNLPIYQGGLVNSRVREAVANQEKARHDLETATRDASLQARQAWLDVSSGAARVQALEQALASTRTQLDSTRLGLQVGVRTSLDVLNAEQQVLSASRDLAGARYAYLLAGLSLKAAAGSLSADDLRAIDALLSRQPDSPPLSAVDPPATAAPAARLLKQGSLTRGQADQTAAC*